Rugosibacter aromaticivorans: PG1C_10735
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Entry
PG1C_10735 CDS
T03689
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rbu
Rugosibacter aromaticivorans
Pathway
rbu03030
DNA replication
rbu03410
Base excision repair
rbu03420
Nucleotide excision repair
rbu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PG1C_10735
03410 Base excision repair
PG1C_10735
03420 Nucleotide excision repair
PG1C_10735
03440 Homologous recombination
PG1C_10735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbu03032
]
PG1C_10735
03400 DNA repair and recombination proteins [BR:
rbu03400
]
PG1C_10735
Enzymes [BR:
rbu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PG1C_10735
DNA replication proteins [BR:
rbu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PG1C_10735
DNA repair and recombination proteins [BR:
rbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PG1C_10735
NER (nucleotide excision repair)
GGR (global genome repair) factors
PG1C_10735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AJP48782
UniProt:
A0A0C5J108
LinkDB
All DBs
Position
2187061..2189841
Genome browser
AA seq
926 aa
AA seq
DB search
MPTLLLVDGSSYLYRAFHALPDLRNTANEPTGAIRGVLSMLRVLEADYKADYRAVVFDAK
GKTFREDWYPEYKAHRPAMPEDLAAQIPLLHECIRAAGWPLVMIDGVEADDVIGTLAHAA
TAAAIDCVISTGDKDLAQLVNHHVTLINTMSNETLDEAGVLAKFGVPPERIVDYLTLMGD
AVDGVPGVNKVGPKTAVKWLTQYGSLDGVVAHADQISGVVGENLRQHLDFLPLGKKLVTV
VCNLDLPTTITELTPQVPDTDKLREFFTRLEFKSWLRELGAPQKDDPTVTTQDAAHVAVP
PEPSRDGLLNPSLDKTFITEPDRSGYACILDATQLDTWLARLDTATLVALDTETTSLNPM
QAQLVGISFALITDGELQAAYLPLGHVYAGAPQQLPLTETLEKLRPWLESAQHQKLGQHL
KYDRHIFANHGMQLAGIVEDTLLESYVLESDKPHDLGSLAARHCDLKTLSYDDITGKGAS
RISFAQVDILRATEYAAEDADVTWQVHQVLRPQLAAEPALEDLYREMELPVAEVLFRIER
NGVLIDAAALTQQSHELGRKMQTIEEEAQALAGQPFNLNSPKQLAEILFVRQALPVVKKT
PSGAPSTDEEVLEKLAEDYPLPKKILEYRSLAKLKNTYTDKLPQMVEHSTGRVHTSFSQA
VAVTGRLASSEPNLQNIPIRTPEGRRIRSAFIAPPGHRIASADYSQIELRIMAHLSNDAR
LLDAFAKGEDVHRATAAEIFGITPIEVTSEQRRAAKVINFGLIYGMSAFGLARELKLDRS
AAAAYMDRYFARYPGVARYMEETRQAARSQGYVETIFGRRLWLPEIRSANAARRQGAERA
AINAPMQGTAADLIKRAMIKVQGWLEQQKMRTLLILQVHDELVLEVPEDELATVREALPK
LMSGVAELKVPLLIEIGAGANWDEAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgcctactttattactcgtcgatggctcgtcttatctctaccgcgcctttcacgccctg
cccgatttgcgcaataccgcgaatgaacccactggcgccatccgcggcgtgctctcgatg
ttgcgcgtgttggaagccgactataaggcagattaccgcgccgtggtgttcgacgccaag
ggcaagacttttcgcgaagactggtatccggaatacaaagcacatcgccccgccatgccc
gaagatctcgccgcgcagattccgctgctgcatgaatgcatccgtgcggcgggctggccg
ctggtgatgatcgatggcgtcgaggccgacgatgtgatcggcacgctggcgcatgcagcc
acggctgcggccatcgactgcgtgatttcgactggcgataaagacttggcgcagttggtg
aaccatcatgtcacgctgatcaacaccatgagcaacgagacgctcgatgaagcaggcgtg
ctggcgaaattcggcgtgccaccggaacgcatcgtcgactatctgacgctgatgggcgac
gccgtggacggcgtgccgggcgtaaacaaagtcgggccgaagactgcggtgaaatggctc
acgcaatacggctcgctggacggcgtcgtcgcccatgccgaccagatcagtggtgtggtg
ggcgagaacttgcggcagcatctcgactttttaccgttgggtaaaaagctggtcactgtg
gtttgcaatctggatttaccaacgacgatcactgagctgacaccgcaagttcctgacact
gacaaactacgtgagttcttcacgcgcctggaattcaaaagctggttgcgagaattggga
gcgccacagaaagatgatcccaccgttaccacgcaagatgctgcgcatgtcgccgtacca
ccagagccgtccagagacggacttttgaatccgtctctggacaagacttttatcaccgag
cccgatcgcagcggctatgcatgcattcttgatgccacgcagctcgacacctggctggcg
cggctcgatacagccacgctcgtcgccctggataccgaaaccaccagcctcaaccccatg
caggcgcagctggtgggcatttcttttgcgctgataactgatggtgaactccaggccgcg
tacctgccgctgggccatgtctacgccggtgcgccgcagcaactgccgcttaccgaaaca
ctggaaaagctgcgtccctggctggaatcggcacagcatcaaaaacttggccagcatctc
aaatatgaccggcacatcttcgccaatcacggcatgcaactcgcaggcatcgttgaggac
acgttgctcgaatcctacgtgctcgaatccgacaagccacacgatcttggttctctggcc
gcgcggcattgcgatttgaaaaccctgagctatgacgacatcaccggcaagggtgcctcg
cgtatttcctttgcccaggtcgacatcctccgcgccaccgaatacgccgctgaagacgct
gatgtcacttggcaagtgcatcaggtgctacgtccgcaactcgccgcggaaccagcactg
gaagatttgtatcgtgaaatggaactgcccgttgccgaagtattgttccgcatcgagcgc
aacggcgtgctgattgacgccgccgcactcacccagcaaagccacgagttgggccgcaag
atgcagacgatcgaagaggaagcgcaagcgttggcgggccagcctttcaacctcaattca
cccaaacaactcgccgaaatcttgttcgtccggcaagccttgccggtggtcaaaaaaaca
ccttcgggcgcgccatcgacggatgaggaggtgctggaaaaactcgccgaggattacccg
ctgccgaagaaaatacttgagtaccgtagcctggccaaacttaaaaacacctataccgac
aagctgccgcaaatggtcgaacacagcacgggccgcgtgcacaccagcttttcgcaagcc
gtggcggtcaccgggcggctggcctccagtgaacccaatctgcaaaacattcccatccgc
acgcccgaaggccggcgcatccgttctgccttcatcgccccgcccggccaccgtatcgcc
agcgccgactattcgcagatcgagctgcgcatcatggcgcatttgtcgaacgatgcccgt
ctgctcgatgcgtttgccaaaggtgaagacgtgcaccgcgccacagcggccgagattttc
ggcattacgcccatcgaggtaacgagcgaacaacgtcgcgccgccaaagtcatcaacttc
ggcctgatctacggcatgagcgccttcggcctcgcccgcgaattgaagctggaccgcagc
gcagcggcggcctacatggatcgctatttcgcgcgttaccccggcgtggcccgttacatg
gaagaaactcgccaggccgcccgtagccagggctatgtcgaaaccatttttggccgccgc
ctgtggttaccggaaatccggtcggccaacgcggctcgccgtcaaggcgcagagcgcgcc
gcaatcaacgcgccgatgcaaggcaccgcagctgatttgatcaagcgcgcgatgatcaaa
gttcaaggctggcttgagcagcaaaaaatgcgcaccctgctgatcctgcaagtgcatgac
gaactggtattggaggtgccggaagacgaactcgccactgtacgcgaagcgctgcccaaa
ctaatgagcggcgtggccgaactcaaggtgccgctactgatcgaaatcggcgctggcgcc
aattgggatgaagcgcactaa
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