Rugosibacter aromaticivorans: PG1C_12245
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Entry
PG1C_12245 CDS
T03689
Name
(GenBank) hypothetical protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rbu
Rugosibacter aromaticivorans
Pathway
rbu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PG1C_12245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbu03400
]
PG1C_12245
Enzymes [BR:
rbu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PG1C_12245
DNA repair and recombination proteins [BR:
rbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PG1C_12245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
AJP48985
UniProt:
A0A0C5JAR3
LinkDB
All DBs
Position
complement(2511280..2512200)
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AA seq
306 aa
AA seq
DB search
MKTTNLSCTVKLPDNFRRDDVLDFHRRDIQMIAERVAEDLLLKGLMWQGHPACLNIQFHD
RHATIGLAIDGLIKNETDALIRMASMVRRMLGLTQAIEDFEQHYRHHRQLGSLIAGHPGL
RVPLTATPFEALTWAITGQQISVNAAVSVRRKLIQTVGVQHTGGLWCYPDAHQMAGIDEA
ALRRAGFSQAKARTLIVLSQAIEQNRLPLDAWVNAPIVDTPLADEMSRQLLEVHGIGPWT
VSYALLRGFGFLDGSLHGDAAVRRKMQRLLRSDEKISEQWAQYWLADFSPWRALVAAHLW
AMPLEG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgacaaacctctcttgcactgtcaaactgcccgacaattttcgtcgggacgat
gtgttggatttccaccgccgcgatattcagatgatcgccgagcgggtggcggaagattta
ctgctcaaggggttgatgtggcaagggcatcccgcctgcttgaatatccaatttcatgat
cggcatgcaacgatagggctcgctattgatggactgattaaaaatgaaacggatgcgctg
atacgcatggcaagcatggtgcggagaatgctcggcttgacgcaagcaatcgaagatttt
gagcagcactatcgacatcatcgacaacttggctcactgattgctggccaccccggactg
cgtgttccgctaaccgcgacgccattcgaagcgctgacttgggcgattacgggacaacag
atcagcgtaaatgccgcagtttctgtgcgacgaaaactcattcagaccgttggggtgcag
cataccggcggcttgtggtgttacccggatgcgcaccagatggctggcatagatgaggct
gctttgcggcgggctggattttcgcaagcaaaagcccgcacgctgatagtgctgagtcaa
gccattgagcaaaatcgactgccactcgatgcgtgggtcaatgcgcctatagtggataca
cccctagccgatgaaatgagtcggcaattgcttgaggtgcacggtattggcccttggacg
gttagctacgcgctgttgcgtgggtttggtttccttgatggttcgctacatggtgacgct
gcagtgcggcgaaaaatgcaacgattgcttagatctgacgaaaaaataagtgaacaatgg
gcacagtattggctggctgatttttctccctggcgtgcattggtcgctgcccatttatgg
gcaatgccgttggaaggttag
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