Rugosibacter aromaticivorans: PG1C_12435
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Entry
PG1C_12435 CDS
T03689
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rbu
Rugosibacter aromaticivorans
Pathway
rbu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rbu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PG1C_12435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbu03021
]
PG1C_12435
03400 DNA repair and recombination proteins [BR:
rbu03400
]
PG1C_12435
Enzymes [BR:
rbu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PG1C_12435
Transcription machinery [BR:
rbu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PG1C_12435
DNA repair and recombination proteins [BR:
rbu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PG1C_12435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AJP49014
UniProt:
A0A0C5JB89
LinkDB
All DBs
Position
complement(2554605..2555582)
Genome browser
AA seq
325 aa
AA seq
DB search
MQTLLKPRSIDVQQLSPLHARVVMEPFERGFGHTLGNALRRILLSSIEGVAPTEVSIEGV
LHEYSTLDGVREDVVDILLNVKGVVIKMHNRREAILTVSKVGEGVVTAGDIVGGHDIEIV
NPEHVIAHIAPGGQLKMEIRVESGRGYIPANQRQIARENMAIGQIMLDASFSPVRRVSYA
VESARVEQRTDMDKLILDIETNGAIDNAEEAIRTAARILMEQLSFFADLEGTAASAESAE
GSSVSPILVRPVDDLELTVRSANCLKAENIYYIGDLIQRTESELLKTPNLGRKSLNEIKE
VLATRGLSLGMRLDGWPPEGLERLA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacactgcttaagccgcgtagtattgatgtgcagcaactttcacctctacatgca
cgtgtcgtgatggagcctttcgagcgtggctttggtcatactttgggcaacgctttgcgg
cgaattttattatcttctatagaaggtgttgctcccaccgaagtttcaatcgaaggcgtg
ctgcacgagtactcaaccttagatggtgttcgtgaggatgtggttgatatccttttgaac
gtgaagggtgttgtcatcaagatgcacaatcgccgtgaagccatactcacggttagcaag
gttggagaaggtgttgttactgcaggggatatcgttggtgggcatgacatcgaaatagtt
aaccctgagcatgtgattgcacatattgcaccaggtggtcagttaaaaatggaaattcgt
gttgaatctggtcgcggatatattccggcgaatcagcgacaaattgcacgggaaaatatg
gctattgggcagatcatgctggatgcttcctttagccctgtgcgccgtgtaagttacgct
gttgaatctgcgcgtgttgaacaacgcacggatatggataagcttattcttgacattgaa
acaaacggtgcaattgataacgcagaagaagcgatcagaactgctgcccgtattttgatg
gaacagctctcgttttttgctgatcttgaaggtactgcagcgtcagctgaatccgctgag
ggctcatctgtttcgcccatcttagttcgcccagtggatgatcttgagctaactgttcgt
tcagcaaactgcttgaaagctgaaaatatttactatatcggcgatctgattcagcgtaca
gagtctgagcttcttaagacgccaaatctgggtcgtaaatcactgaatgaaattaaagaa
gtgttggctacacgtggactttctctgggaatgcgattggacgggtggccgcccgaaggc
cttgaaaggcttgcgtaa
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