Rhizobium brockwellii: RLCC275e_02015
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Entry
RLCC275e_02015 CDS
T09359
Name
(GenBank) PAS domain S-box protein
Organism
rbw
Rhizobium brockwellii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
PAS_8
PAS
PAS_4
PAS_9
HATPase_c_3
Diguanyl_cycl_sensor
PAS_7
DUF3774
Motif
Other DBs
NCBI-ProteinID:
QJX03805
LinkDB
All DBs
Position
complement(402351..406241)
Genome browser
AA seq
1296 aa
AA seq
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MPAVQYPFIDIAVHARVRERFSRGEAMVLFSADLARLLWANGAGAELFGHSAVYDLLDQG
VDRTDITFRQLQTAARQLTDIGDSRSLMIRVAKGFQRAQVQAAAELIRLSQGEKAILFSV
PVSVKPLAAGASAAQMLQGLDDPDTHMAVIGANGEVIAASPGFASLGISEQTAKTLINLA
GAHPDRLVKRPVATGRGNLPAAVGKLSDDPALNLLFAVETAVGHLDPVDTPALAPVDAPA
LDPVDAPALDSVDAPAQEESAPSAEVLQDEPVAATGFTEIIDAVSGIEEVEETLEEIAGE
NEQPAETAVASADKAIDGMDPAEDAVPESDDGVIDSSADDPAAVIEDDVTSIVETVETAT
TAEPPVEASETPIEDAPEAVHEEAAIATPVVPDVPPAPQLEAEPGFVFRPNSRATRFVWK
IDAEGRFNEVSHEFAAAVGPHASDIIGSAFGDVAALFNLDPDGKLSEALARRDTWSGKTI
LWPVEGTSLVVPVDLAALPTYTRNRDFDGFRGFGVVRLSDAQEDPLALGLTLGPDGIGHD
AASLGPPAETIAEVAHEAETVLEEPLTDPAPTQEVEDQPPTASEPQTEPVPEEPAPEEIA
TEQTTVETPAWESAAEKAEGSADAGDVSTAEPIAELPQEPPALRISETPNRRLSDKIVQL
HNTGAGLTAAEQANFREIAKRLEAFGANKDEPAVPAPMEPAATETSSFEEASGPEAFEAE
TPTADQAEIPSIEEIAPQEAIFENAVEAEREDDGAAEEPAVIAEDEATEGLEETTSQIEV
LTSFIPPRIKMTDGLSVGTVDQLPVAVLIHIGDALIHANPEFMRLTGYGTLDALREVGGI
EGLLQRRELEEKAAGSGTMMLVKADDTLAPVTARLQSVRWEDANALMLALMPVEGKDDGR
GDANRFDGRSEDRPERMVEKVAKLQVEVEELRSILETATDGVVVIGTEGDIRSMNRSASA
LFNYDEQETRGKPFVMLFAHESQKAVIDYLNGLAGHGVASVLNDGREVIGREAAGGFVPL
FMTMGQLTSSNGYCAVIRDITQWKRTEDELRNAKGAAETANAHKTDFLARVSHEIRTPLN
AIIGFSDMMAGERFGPIGHPRYIEYANDIGRSGRHVLDIVNDLLDISKIEAGEMDLDFAA
VGLNEAVSEAVALVQPQANGQRVIIRTALSQAVPEVVADLRSIKQIALNILSNAIRFTPS
GGQIVVSTSYEANGSVVLRVRDTGIGMTRSELDQAMKPFRQVSSTQSRHRGDGTGLGLPL
TKAMVDANRATFTINSAPNEGTLVEITFPSQRVLAG
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagtccaatatccgttcatcgatatcgccgtgcatgcacgggtgcgggaacgc
ttttcacgcggcgaggccatggtgctgttttcggccgatctcgcccgtctgctctgggcg
aacggtgcaggtgccgagcttttcggccattcggcagtctatgacctgctcgatcagggg
gtcgaccgcaccgacatcaccttccgccagctgcaaaccgcggcgcgccagctcaccgat
atcggcgacagccgcagcctgatgatccgcgttgccaagggctttcagcgtgcgcaggta
caggcggctgccgaactgatccggctttcccaaggcgaaaaggccatccttttttctgtg
ccggtctcggtaaaaccactcgcggccggcgcatcggcggcacagatgctgcaggggctc
gatgatcccgacacgcatatggcggtgatcggcgcaaatggcgaggtcatcgcggcttcg
ccgggctttgcctcactcgggatctccgagcagacggcaaagaccttgatcaaccttgcc
ggcgcgcatcccgaccggctggtgaagcgacctgtcgccaccggcagaggcaatcttccg
gccgcggtcggcaagctcagcgacgatccggcgctcaatctgctctttgctgtcgagacc
gcggtcggtcatctcgacccggtcgacacgcccgcgcttgccccggtcgatgcgcccgcg
ctcgatccagtcgatgcgccagcgctcgactcggtcgatgcgcccgcacaggaagaaagc
gcaccgtctgccgaagtgcttcaggacgaacccgtcgccgctacaggcttcaccgaaatc
atcgacgcggtctcggggatcgaagaggtcgaggagacgcttgaggagatcgccggcgaa
aacgagcaaccggctgaaacggctgtggcatccgcagataaggcgattgacgggatggat
cctgccgaggacgcggtgccggagagcgacgacggcgtgatcgatagcagcgcggatgac
cccgccgccgtcatcgaggacgatgtgacctctattgtggagacggtggaaacggcgacg
acggcggaaccgcctgttgaagccagcgaaacgcctatcgaagacgcgccggaagcagtc
cacgaagaggccgctatcgcaacgcctgtggtccccgacgtgccccctgcccctcagctt
gaggctgagcccggctttgtcttcagaccgaatagccgcgccacgcgcttcgtctggaag
atcgacgccgaaggccggttcaacgaggtcagccacgaatttgccgcggccgtcggtccg
catgcgtccgacatcatcggctctgccttcggcgatgtcgccgccctcttcaatctcgat
cctgacggcaagctttctgaggcgctggcccgccgcgacacatggtcgggcaagacgatc
ctctggccagtcgaaggcaccagcctcgtcgttccggtcgatctggcggcgctgccgacc
tatacccgcaaccgcgacttcgatggtttccgcggcttcggcgtcgtccggctttccgat
gcgcaggaagatccgctggcgctcggcctgacgctcggccctgatggtatcggccacgat
gcagcgagcctcggcccgcccgccgagaccattgccgaggtggcacacgaagcggagaca
gtgcttgaagagcccctgaccgatcccgccccgacgcaggaggtcgaggatcagccgcct
acggcaagcgaaccgcagacggaaccagtgccggaagagccagcgccggaagagatcgcc
accgagcaaacgaccgtcgagactcctgcctgggaaagtgctgccgaaaaagcggaaggc
agcgccgatgccggcgacgtttccaccgccgagccgatagcggaacttccgcaagagccg
ccggcgcttcggatttcggaaacgcccaaccgccggctctccgacaagatcgttcagctc
cacaacaccggtgccggactgacggccgccgaacaggccaatttccgcgagatcgccaag
cgcctcgaagccttcggcgccaacaaggacgagcctgccgtccctgcgccgatggaaccc
gctgccaccgaaacctccagcttcgaagaggcctccggacccgaagcgttcgaggccgaa
acacccaccgccgaccaggcggagataccatcgatcgaggagatcgcgccgcaggaagcg
atcttcgagaatgccgtcgaggcggagcgcgaagacgacggcgccgccgaagaaccggct
gtcatcgccgaggacgaggcaacggaagggctggaggagacgaccagccagatcgaggtt
ctcaccagcttcatcccgccgcgcatcaagatgacggacgggctttcggtgggaacggtc
gaccaactgcctgttgccgtgctcatccatatcggcgatgcgctgatccacgccaatccg
gaattcatgcggttgacgggctacggcacgctcgacgcattgcgcgaggtaggcggcatc
gaaggcctgctgcagcgccgcgaactcgaggagaaggccgcgggctccggcaccatgatg
ctcgtcaaggccgatgatacgctggcgccggtgaccgcgcggctgcaatcggtgcgctgg
gaagacgccaatgccctgatgctggcgctgatgccggtggaaggcaaggacgatggccgc
ggcgacgcaaaccgtttcgacggtcggtccgaagaccgccccgagcggatggtcgagaag
gtcgctaaactccaggtcgaagtggaagaattgcgctcgatcctggaaacggcgaccgac
ggcgtcgtcgtcatcggcaccgagggcgacatccgctcgatgaaccggtcggccagcgcg
cttttcaattacgacgagcaggagacgcgtggcaaacccttcgtcatgctgtttgcccat
gagagccagaaggcggtgatcgactatctgaacggcctcgccggccatggcgtagcaagc
gtgttgaacgacggacgcgaagtgatcggccgcgaggccgccggcggcttcgtgccgctg
ttcatgacgatgggccagctcacctcctccaacggctattgcgccgtcatccgcgatatc
acccagtggaagcgcaccgaggacgagctgcgcaacgccaagggtgcggccgaaaccgcc
aacgcccacaagaccgatttcctcgcccgcgtgagccatgagatccgcacgccgctcaac
gccatcatcggcttttccgacatgatggccggcgagcgcttcgggccgatcggccatccc
cgttatatcgaatatgccaacgacatcggccgctccggccggcacgtcctcgatatcgtc
aacgacctgctcgacatctcgaagatcgaggcgggcgagatggatctcgattttgccgcc
gtcggcctcaacgaagcggtctccgaagccgtggctctggtacagccgcaggcgaacggc
cagcgcgtcatcatccgcacggcgctgtcgcaggcagtacctgaggtcgtagcggatctg
cgctcgatcaagcagatcgcgctcaacatcctgtcgaacgccatccgcttcaccccgtca
ggcgggcagatcgtcgtttcgacgtcctatgaggcgaatggcagcgttgtcctcagggtc
cgcgataccggcatcggcatgacgcgcagcgaactcgaccaggcgatgaagccgttccgg
caagtctcctcgacccaatcgcgtcatcgcggcgacggcaccgggctcggcctgccgttg
accaaggcgatggtcgatgccaaccgggcgaccttcacgatcaattcggcgccgaacgag
ggcacgctcgtcgagatcaccttcccgtcacagcgcgtgctggccggctga
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