Rhizobium brockwellii: RLCC275e_10115
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Entry
RLCC275e_10115 CDS
T09359
Name
(GenBank) mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
rbw
Rhizobium brockwellii
Brite
KEGG Orthology (KO) [BR:
rbw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbw02000
]
RLCC275e_10115
Transporters [BR:
rbw02000
]
Other transporters
Pores ion channels [TC:
1
]
RLCC275e_10115
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Ortholog
Paralog
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GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
MS_channel_TM1
DUF6987
LigB
Motif
Other DBs
NCBI-ProteinID:
QJX05278
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Position
complement(1990688..1992838)
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AA seq
716 aa
AA seq
DB search
MRINDDRHPRRGVCAFLTVVFSMLLLASANPASAAEPTNSSAPIRVIIELPNDDSGRALV
NRIVPGNQEPAQPVAVSQEAAPTSIATSLQDLRQRLLTLVDAVPTLPGQIQSAIQVFQTD
DRIEPVGLILAVILFVAGGFVAQRLAWWSGRGLLHFVLNAPADTVRQRIRLHAARLSMGL
LALIGYLIGSLGAFILFPWPAVFRDIALIMLSAALMVRLGVLVGRIVIAPGARLPHMRLL
TLVTSLAWFWYYWLLGIVAVLAAGWATIEMIGTIGASPILLDLFTAAWLGVVSIALIVMI
WLRHFRSDGPPVSRLVCVGFSASIIVSWLLWVSGLHGAFWTVIIITLLPLTVAVARDIIR
RIIQSGEGQAVEDPAIVGWSVVIMQTLRNGLIVVAALLIARAWNVNLSDLAAAETVTTRL
IRAGIRIVIVLLVTDVIWKLASTLIDSQMAVASRSEQGGHHEGPDARRRQRLNTLLPILR
NVLFLAIGAVGFLMILDAVGIQIGPLLAGAGVVGIAVGFGAQTLVKDIISGVFYLFDDAF
RIGEYIQAAKYKGTVEGFSLRSIRLRHHRGPVTIVPFGELGAVQNLSRDWVIDIITLTLN
YDSDLEEVRKTIKRIGVELQEDAELGPNIIEPLKMQGIEQMADYGVQIRLKFMTKPGEQF
GVRRKALAMLKKTFAEKGIQFATPTVHVSGGPADAAATAAASELQRPSKVISTLEE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaacgacgaccgtcatccccgccgaggagtgtgcgcattcctgacggtggta
ttttcaatgcttctgctggcgagtgcaaaccccgcatcggcggctgagccgaccaattcc
tcggcgccgatccgggttattatcgaattgccgaatgatgattccggacgagcgctggtc
aatcggatcgttccgggcaatcaggaaccggcgcagccggtagcagtctcgcaagaggcg
gcaccgacgtcgatcgccacgtcgctgcaggatttgcgccagaggttgctcacactcgtc
gatgccgttccgacgctgcccggtcagatccaatcggcgatccaggtcttccaaacggat
gatcgtatcgaacctgtcggcctgatcttggcggtcatactcttcgtcgcaggcgggttc
gttgcgcagcgccttgcctggtggtcagggcgagggctgcttcattttgtactgaacgcg
cctgccgacacagtccggcagcggatcaggctccacgccgcccggctttcaatgggtctt
ctggcgttgatcggttacctgatcggaagtctcggcgcgtttatcctctttccatggcct
gccgtgtttcgcgatattgcactcatcatgctgtcagccgcgctcatggtgcgccttggc
gtgctcgtgggccgcattgtcatcgcgccaggcgcccgcctgccgcatatgcggcttctg
acgcttgtcacctcgcttgcctggttctggtactactggctcctcggaatcgtcgctgtg
ctggcggctggctgggccaccattgaaatgatcgggacgatcggggcttcacccatcttg
ctcgacctctttaccgcagcatggcttggtgtcgtttcaatcgctctgatcgttatgatc
tggctgcggcactttcgttccgacgggccgccggtgagccggctggtctgtgtcggcttc
agcgcgagcatcatagtatcgtggctgttatgggtgtccgggctccacggggcattctgg
acggtgatcatcattacgcttctgcctcttaccgttgcggtggctcgtgatatcattcgg
cgcattattcaatccggggaggggcaggcggtcgaggatccggccatcgtcggatggtct
gttgtcatcatgcaaacgctgcggaacggcctcatcgtggtcgccgcgctgctcattgcc
cgggcgtggaatgtcaatctcagtgatctcgccgcagccgaaacggtgaccacgcgtttg
atccgcgcaggaatccgcatcgttatcgtgctgctggtgaccgacgtaatctggaagctc
gcaagcacgttgatcgacagccagatggcggtggcgtcgcgaagcgagcaggggggacat
cacgagggtcccgacgcgcggcgacgtcagcggttgaataccctccttcccattcttcgc
aatgtgctgttcctggcaatcggagccgtcggcttcctgatgatcctggatgccgttggc
attcagatcggaccgctgctggcgggcgccggtgtcgtcggcatagccgtcggcttcggt
gcccaaacactcgtcaaggacatcatctccggcgtcttctatctgttcgacgatgccttt
cgcatcggcgaatacatccaggcggcgaaatataaggggacggtagaaggtttctcgctg
cgatcgatccgcttgcgccatcaccgcggcccggtcaccatcgttcccttcggcgaactc
ggcgcggtgcaaaacctcagccgtgactgggtcatcgacatcattacgctcaccctgaac
tatgacagcgacctcgaggaggtgcgcaagaccatcaagcgtatcggcgttgagcttcag
gaggatgccgaactcgggcctaacatcatcgagcccttgaaaatgcaagggatcgagcag
atggcggattatggtgtgcagatacggctgaagttcatgacgaaacccggcgaacagttc
ggcgttcgccgaaaggcccttgccatgctcaagaagacattcgcggaaaaaggcatccag
tttgcaacgccgaccgttcatgtttccggcggtcccgccgatgcagcggcaaccgccgcc
gcgtcagagctgcaaagaccatcgaaagtcatctcgacacttgaggaatag
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