Rhizobium brockwellii: RLCC275e_14255
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Entry
RLCC275e_14255 CDS
T09359
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rbw
Rhizobium brockwellii
Pathway
rbw03420
Nucleotide excision repair
rbw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rbw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RLCC275e_14255
03430 Mismatch repair
RLCC275e_14255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbw03400
]
RLCC275e_14255
Enzymes [BR:
rbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RLCC275e_14255
DNA repair and recombination proteins [BR:
rbw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RLCC275e_14255
MMR (mismatch excision repair)
Other MMR factors
RLCC275e_14255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_11
DUF4420
Motif
Other DBs
NCBI-ProteinID:
QJX06060
LinkDB
All DBs
Position
2826076..2828556
Genome browser
AA seq
826 aa
AA seq
DB search
MSNSFDDMPFFDEEPGEMARKPQPPAAPAERGPVAGGGIAARAMAARDGGKRPDYLAGLN
PEQTEAVETLEGPVLVLAGAGTGKTRVLTTRIAHILNTGRAFPSQILAVTFTNKAAREMK
ERIALLVGGAVEGMPWLGTFHSIGVKLLRRHGELVGLRSDFTILDTDDVVRLIKQLIQAE
GLDDKRWPAKQFAGMIDTWKNKGLGPADIPEGDARAFANGRGRDLYVAYQARLSTLNACD
FGDLLMHPIAIFRKNPDLLKEYHGRFRYILVDEYQDTNTAQYMWLRLLAQRPKGELQNVC
CVGDDDQSIYGWRGAEVDNILRFEKDFPGAKVIKLERNYRSTEHILGAAAHLIAHNEGRL
GKTLFTDRSDPDDAKVQVHASWDSEEEARAIGEEIEQLQRGKHLLNDMAILVRASFQMRE
FEDRFVTLGLNYRVIGGPRFYERLEIRDAMAYFRLVAQASDDLAFERIINTPKRGLGDTT
VRALHDYARARDIPMLAAAADIIETDELKPKARKALFDVIQSFRRWQELLENTPHTELAE
QILEESGYTDMWKNDKSAEAPGRLENLKELIRSMESFESMRGFLEHVSLVMDAETNANLD
AVSIMTLHSAKGLEFDTVFLPGWEEGLFPHQRSLDESGRAGLEEERRLAYVGITRAKHRC
HIWFVSNRRIHGLWQSTLPSRFLDELPVTHVEVAEMEQSYGGYGRGGYGQSRFDKAEPFA
NSYSTPGWKRAQANKTDATRDNWGTRSGHAVERIGYGESGPKGRTIEGELVVKSTSAEPS
RFTLGDRVFHLKFGNGNITGIEGNKLTIEFDRAGQKRVLDGFVERV
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatagtttcgacgatatgcccttcttcgacgaagagccgggcgagatggcgcgc
aagccgcagccgcctgccgcacccgccgaaagggggcctgtcgccggtggcggcatcgcg
gcgcgcgccatggcggctcgtgacggcggcaagcggccggattacctcgccgggctgaac
cccgagcagaccgaagccgtcgaaaccttggaaggccccgtcctcgtgctggccggcgcc
ggcaccggcaagacgcgcgtactgacgacccgcatcgcccatatcctcaacaccggccgt
gccttcccctcgcagatcctcgcagtcaccttcaccaacaaggcggcccgcgagatgaag
gagcgcatcgcgctgctcgtcggtggcgccgtcgaaggcatgccctggctcggcaccttc
cattcgatcggcgtcaaacttctgcgtcgccacggcgagctcgtcggcctgcgctccgat
ttcaccattctcgataccgacgacgtcgtccgcctgatcaagcagttgatccaggccgaa
ggcctcgacgacaagcgctggccggccaagcagttcgccggcatgatcgatacctggaag
aacaagggtctcggccccgccgatatccccgagggcgacgcccgcgcctttgccaacggc
cgcggccgcgatctctatgtcgcctatcaggcccgcctctcgacactgaacgcctgcgat
ttcggcgatctgctgatgcacccgatcgcgatcttccgcaagaacccggatctcctgaag
gaatatcacggccgtttccgctatatcctcgtcgacgagtaccaggataccaacacagcc
cagtacatgtggctcaggcttctcgcccagcgccccaagggcgagctgcagaatgtctgc
tgcgtcggcgatgacgaccagtcgatctatggctggcgcggcgccgaggtcgacaatatc
ctgcgcttcgagaaggacttccccggcgccaaggtcatcaagctcgagcgcaactaccgt
tcgaccgaacatatcctcggcgcagccgcccatctgatcgcccataatgagggccgcctc
ggcaagacgctgttcaccgaccgctccgaccccgacgacgccaaggtgcaggtccacgcc
tcctgggattcggaggaggaagcccgcgccatcggcgaggagatcgagcagctccagcgc
ggcaagcatctcttgaacgacatggcgatcctcgtgcgcgcctccttccagatgcgtgaa
ttcgaagaccgcttcgtcaccctcggcctcaactatcgcgttatcggcggcccgcgcttc
tacgagcgcctcgaaatccgcgatgccatggcctatttccgcctggtcgctcaagcctca
gacgacctcgccttcgagcgtatcatcaacaccccgaagcgcggcctcggcgatacgacg
gtgcgtgcgctgcacgactatgcccgtgcccgcgatatcccgatgcttgcggcagccgcc
gacatcatcgagacggacgagctgaagccgaaggcgcgaaaggcgctcttcgacgtgatt
caatctttccgccgatggcaggaactgcttgaaaatacaccgcataccgaacttgccgag
cagatcctcgaagagtccggctataccgacatgtggaagaacgacaagagcgccgaagcc
cccggccgccttgaaaacctcaaggaactgatccgttcgatggaaagcttcgagtcgatg
cgcggcttcctcgaacacgtctccctcgtgatggatgccgaaaccaacgcgaacctcgat
gcagtctcgatcatgacgttgcactcggccaagggcctcgaattcgacaccgtcttcctg
cccggctgggaggaaggcctcttcccgcaccagcgctcgctggatgagagcggccgcgcc
ggcctggaggaggaacgccgcctcgcctatgtcggcatcacccgcgccaagcaccgctgc
cacatctggttcgtctccaaccgccgcatccacggtctctggcaatcgaccctgccctcg
cgtttcctcgacgaactgccggtcacccatgtcgaggtcgccgaaatggagcagagctat
ggcggttacggccgcggcggctacggccagtcgcgcttcgacaaggccgaacccttcgcc
aattcctattccacacccggctggaaacgcgctcaggccaacaagaccgacgccacacgc
gacaactggggcacccgctctggccacgccgtcgaacgcatcggttacggcgaaagcggt
ccgaagggacgcacgatcgaaggtgagctggtggtgaaatccacatccgcggaaccgtcg
cgcttcacgctcggcgaccgcgtgttccacctgaaatttggcaacggcaacatcaccggc
atcgaaggcaacaagctgacgatcgagttcgaccgggcgggacagaagcgggtgctggat
gggttcgtcgagcgcgtgtga
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