Rhizobium brockwellii: RLCC275e_20150
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Entry
RLCC275e_20150 CDS
T09359
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rbw
Rhizobium brockwellii
Pathway
rbw00630
Glyoxylate and dicarboxylate metabolism
rbw00680
Methane metabolism
rbw01100
Metabolic pathways
rbw01120
Microbial metabolism in diverse environments
rbw01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rbw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RLCC275e_20150 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
RLCC275e_20150 (fdhF)
Enzymes [BR:
rbw01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RLCC275e_20150 (fdhF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_Nqo3
Fer4_21
Fer4_6
Fer4_10
Fer4_2
Fer4_9
Fer4_15
Fer4_16
Fer4_4
TPP_enzyme_M
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
QJX07153
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Position
complement(4072024..4074903)
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AA seq
959 aa
AA seq
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MSLIHEIDYGTPASKSEAMVTLTIDGQQISVPEGTSIMRASMEAGIKVPKLCATDMVDAF
GSCRLCLVEIEGRNGTPSSCTTPVAANMVVHTQTGRLKDIRRGVMELYISDHPLDCLTCA
ANGDCELQDMAGAVGLRDVRYGYEGDNHVKARSNGDINLKWMPKDESNPYFTYDPSKCIV
CSRCVRACEEVQGTFALTIEGRGFGSRVSPGMHEHFIDSECVSCGACVQACPTATLTEKS
VIQIGQPEHSAVTTCAYCGVGCSFKAEMRGEELVRMVPWKDGQANRGHSCVKGRFAYGYS
THKDRILNPMIREKVSDPWREVSWDEAFAHVALEFRRIQYQYGREAIGGITSSRCTNEET
YLVQKLIRAGFGNNNVDTCARVCHSPTGYGLGQTFGTSAGTQDFDSVEHSDVVVVIGANP
TDGHPVFGSRLKKRLRQGAKLIVIDPRRTDIVRSPHIEASYHLPLKPGTNVAVMTALAHV
IVTEGLFDEAFIRERCDWSEFEDWAAFVAEPQHSPEETEIFTGVPAADLRGAARLYAKGG
NGAIYYGLGVTEHSQGSTTVIAIANLAMATGNIGRPGVGVNPLRGQNNVQGSCDMGSFPH
ELPGYRHISDDATRDIFEKLWGVKLNNEPGLRIPNMLDAAVDGSFKGIYIQGEDILQSDP
DTKHVAAGLAAMECVVVQDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRINRVRKVMS
PRNGFGDWEVTQKLAQAMGLDWHYTHPSEIMDEIAATTPSFAMVSYDYLDKMGSVQWPCN
EKNPLGSPIMHVNGFVRGKGKFIRTEYVATDERTGPRFPLLLTTGRILSQYNVGAQTRRT
ENIVWHAEDRLEIHPHDAEQRGVRDGDWVKLGSRSGDTTLRALITDRVAPGVVYTTFHHP
TTQANVITTDFSDWATNCPEYKVTAVQVSPSNGPSEWQLEYDEQARQSRRIAGKLEAAE
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcatccatgaaatcgactacgggactccggcttcgaaatccgaggccatggtg
accctcaccatcgacggacagcagatcagcgtgccggagggcacctccatcatgcgcgcc
tcgatggaggccggcatcaaggtgccgaagctctgtgccaccgacatggtcgacgctttc
ggctcctgccggctctgcctggtcgagatcgagggccgcaacggcacgccctcctcctgc
acgacgccggtggcggcaaacatggtggtgcacacgcagacggggcggctgaaggatatc
cgccgcggcgtgatggaactctatatttccgaccatccgctcgactgtctcacctgcgcg
gccaacggcgattgcgaattgcaggacatggcgggcgccgtcggcctgcgcgatgtgcgc
tacggctatgagggcgacaaccacgtcaaggcgcgcagcaatggcgacatcaatctgaaa
tggatgccgaaggacgaatccaatccctatttcacctatgatccctccaagtgtatcgtc
tgttcgcgctgcgtgcgcgcctgcgaggaagtgcagggcaccttcgcgctgacgatcgag
ggccgcggcttcggctcacgcgtttcgcctggcatgcacgagcatttcatcgattccgaa
tgcgtttcctgcggcgcctgcgtccaggcctgcccaacggcgacgctgacggagaaatcg
gtgatccagatcggccagccggagcattcggccgtgaccacctgcgcctattgcggcgtc
ggctgttctttcaaggcggagatgcgcggcgaggaactggtgcgcatggtgccgtggaag
gacggtcaggccaatcgcggccattcctgcgtcaagggccgcttcgcctatggctattcc
acccacaaggaccgtatcctcaatccgatgatccgcgaaaaggtcagcgatccctggcgg
gaagtgagctgggacgaagccttcgcgcatgtggcgctggagttccgccgcatccagtat
caatatggccgcgaggcgattggcggcatcacctcgtcgcgctgcaccaatgaggaaacg
tatctggtgcagaagctgatccgcgccggcttcggcaacaacaatgtcgatacctgcgcc
cgcgtctgccattcgccgaccggctacggcctcggccagacgttcggcacgtcggcgggc
acgcaggatttcgacagcgtcgagcattcggatgtcgtcgttgtcatcggcgccaatccg
accgacgggcatccggtgttcggctcgcggctgaagaagcggctgcgccagggcgccaag
ctcatcgtcatcgatccgcgccgcaccgatatcgtccgctcgccgcatatcgaggcctcg
tatcacctgccgctgaagcccggcaccaatgtcgcggtcatgacggcgctggcgcatgtg
atcgtcaccgaaggcctctttgacgaggcgttcatccgcgagcgctgcgactggtcggag
ttcgaggattgggccgccttcgtcgccgaaccgcagcacagtcccgaagagaccgagatc
ttcaccggcgtgccggcggcggatctgcgcggcgcggcaaggctctatgccaagggtggc
aacggtgcgatctattacggcctcggcgtcaccgaacacagccagggctcgaccacggtc
atcgcgatcgccaacctggcgatggcgaccggcaatatcggccgtccgggcgtcggcgtg
aacccgctgcgcggccagaacaatgtgcagggctcctgcgacatgggttccttcccgcac
gaactgccgggctaccggcacatttccgacgacgcgacgcgtgacatcttcgaaaagctc
tggggcgtgaagctcaacaacgagccaggcctgcgtattccgaacatgctggatgcggca
gtcgatggctctttcaaaggcatctacatccagggcgaagacatcctccagtccgatccc
gataccaaacatgtcgcggccgggcttgcggcgatggaatgcgtcgtcgtgcaggatctg
ttcctcaacgagaccgccaattacgcccatgtcttcctgccgggctcgaccttcctcgag
aaggacggcaccttcaccaatgcggagcgccgcatcaaccgtgtgcgcaaggtgatgtcg
ccgcgcaacggttttggcgactgggaagtgacgcagaagcttgctcaggcgatggggctc
gactggcattacacccatccgtcggagatcatggacgagatcgccgcgacgacgccgagt
tttgcgatggtctcctacgactatctcgacaaaatgggctcggtgcagtggccctgcaac
gagaagaacccgctcggctcgccgatcatgcatgtcaatggcttcgtgcgcggcaagggc
aagttcatccgcaccgaatatgtagcgaccgacgaacgtaccggtccgcgtttcccgctg
ctgctgacaaccggccgcatcctcagccaatataatgtcggagcgcagacgcggcggacc
gagaatatcgtctggcacgctgaagaccggctggaaatccatccgcacgatgccgagcag
cgcggcgttcgcgacggcgactgggtgaagctcggaagccgctccggcgacacgacgctc
agggcgctgatcaccgatcgcgtcgcgccgggtgtcgtctatacgaccttccatcatccc
acgacgcaggcgaacgtcatcaccaccgatttctccgactgggcgacgaactgcccggaa
tacaaggtgacggcggtgcaggtctcgccctccaacgggccgagcgaatggcaactcgaa
tatgacgagcaggcgcggcaatcgcgccgcatcgccggcaagctcgaggcagcggagtga
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