Rhizobium brockwellii: RLCC275e_20380
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Entry
RLCC275e_20380 CDS
T09359
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
rbw
Rhizobium brockwellii
Pathway
rbw00020
Citrate cycle (TCA cycle)
rbw00640
Propanoate metabolism
rbw00660
C5-Branched dibasic acid metabolism
rbw00720
Other carbon fixation pathways
rbw01100
Metabolic pathways
rbw01110
Biosynthesis of secondary metabolites
rbw01120
Microbial metabolism in diverse environments
rbw01200
Carbon metabolism
Module
rbw_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rbw_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rbw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RLCC275e_20380 (sucD)
00640 Propanoate metabolism
RLCC275e_20380 (sucD)
00660 C5-Branched dibasic acid metabolism
RLCC275e_20380 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
RLCC275e_20380 (sucD)
Enzymes [BR:
rbw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
RLCC275e_20380 (sucD)
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Gene cluster
GFIT
Motif
Pfam:
Ligase_CoA
CoA_binding
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QJX07196
LinkDB
All DBs
Position
complement(4121909..4122811)
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AA seq
300 aa
AA seq
DB search
MSILVNKDTKVLVQGLTGKTGTFHTEQALAYYGTQMVGGIHPKKGGETWTGAKGESLPIF
ATVAEGKEKTGANASVIYVPPAGAADAIIEAIDAEIPFITCITEGIPVMDMVRVKARLDR
SKSRLLGPNCPGILTPEECKIGIMPGSIFRKGSVGIVSRSGTLTYEAVFQTSNEGLGQTT
AVGIGGDPVKGTEFIDVLEMFLADEATQSIIMIGEIGGAAEEDAAQFLKDEAKKGRKKPM
AGFIAGRTAPKGRTMGHAGAVVSGGKGDAESKIAAMESAGIKVSPSPARLGKTLVEVLKG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctcgtcaacaaagacaccaaggttctcgttcagggcctaaccggcaagacc
ggcacgttccacaccgaacaggcgctcgcttactacggcacccagatggtcggtggtatc
cacccgaagaagggtggcgaaacctggaccggcgcgaagggcgaaagcctgccgatcttt
gcaaccgttgccgaaggcaaggaaaagaccggcgccaacgcgtccgtcatctatgttccg
ccggctggtgctgccgacgcgatcatcgaggcgatcgacgccgagatcccgttcatcacc
tgcatcaccgaaggcatcccggtcatggacatggtgcgggtcaaggctcgcctcgaccgc
tccaagtcgcgcctgctcggtccgaactgcccgggtatcctgacgccggaagaatgcaag
atcggcatcatgccgggctcgatcttccgcaaggggtcggtcggtatcgtttcccgctcg
ggcacgctgacctatgaagcggtgttccagacctccaacgaaggtctcggccagacgacg
gccgtcggcatcggcggcgacccggtcaagggcaccgagttcatcgacgtcctggaaatg
ttcctggccgacgaagccacccagtcgatcatcatgatcggcgaaatcggtggtgcggct
gaagaagacgcagcgcagttcctcaaggacgaagccaagaagggccgcaagaagccgatg
gctggcttcattgccggccgtacggcgccgaagggccgcaccatgggccatgccggtgct
gtggtttccggcggcaagggcgatgcggaatcgaagatcgcggcgatggaatcggcgggc
atcaaggtatcgccctctccggcccgcctcggcaagacgctggttgaagtcctcaagggc
taa
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