Rhizobium brockwellii: RLCC275e_21945
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Entry
RLCC275e_21945 CDS
T09359
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
rbw
Rhizobium brockwellii
Brite
KEGG Orthology (KO) [BR:
rbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbw03032
]
RLCC275e_21945 (gyrB)
03400 DNA repair and recombination proteins [BR:
rbw03400
]
RLCC275e_21945 (gyrB)
Enzymes [BR:
rbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RLCC275e_21945 (gyrB)
DNA replication proteins [BR:
rbw03032
]
Prokaryotic type
DNA Topoisomerases
RLCC275e_21945 (gyrB)
DNA repair and recombination proteins [BR:
rbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RLCC275e_21945 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QJX07492
LinkDB
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Position
4456695..4459130
Genome browser
AA seq
811 aa
AA seq
DB search
MSDTSATENGVSTEYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADIVTVTLNSDGSVTVTDNGRGIPTDIHTGEGVSAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSVWLKLKIRRHDKIHEMSFTHGVADAPLKVTGDAPNETGTEVSF
MPSTGTFTMTEFDYGTLEHRLRELAFLNSGVRILLTDKRHSDIKQEELRYDGGLEAFVAY
LDRAKKSLVDKPVAIHGEKDGITVEVAMWWNDSYHENVLCFTNNIPQRDGGTHMAGFRAA
LTRQVVSYADSSGITKREKVTLQGEDCREGLTAVLSVKVPDPKFSSQTKDKLVSSEVRPV
VESLVNEALSTWFEEHPSEAKILVGKVVEAAAAREAARKARELTRRKGALDIASLPGKLA
DCSERDPTKSEVFLVEGDSAGGSAKQGRSRENQAILPLRGKILNVERARFDKMLSSQEIG
TLITALGTGIGKDEFNVEKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPQLIERGHLY
IAQPPLYKVSRGKSVQYLKDEKALEEYLISQGLEDASLRLGSGEVRAGQDLREVILDALR
MRALLDNLHSRYNRSAVEQAAIAGALNAELASDPARALALANEVAGRLDIIAEETERGWR
GDVTTDGGLRLERMVRGVKELVVLDMALIGSSDARHIDQLTARLKEIYQTPPSLHRREGD
VEISGPRALLDAIFASGRKGLTMQRYKGLGEMNAEQLWETTLDPNVRSLLQVRVNDATDA
DGLFARLMGDEVEPRREFIQENALSVANLDI
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacatccgcgacggaaaacggcgtaagcaccgaatatggcgcagattccatc
aaggttctgaagggcctcgatgccgtgcgcaaacgccccggcatgtatatcggcgatacc
gacgacggctccggcctgcatcacatggtctatgaagtcgtcgataacgcgatcgacgaa
gcgcttgccggccatgctgacatcgtcacggtgaccctcaattcggatggctcggtgacc
gtcaccgacaatggtcgcggcatcccgacggacatccacaccggcgaaggcgtgtcggcc
gccgaagtcatcatgacgcagcttcatgccggcggtaagttcgaccagaattcctacaag
gtttccggtggcctgcacggcgtcggcgtctccgtcgtcaacgcgctgtccgtctggttg
aagttgaagatccgccgtcacgacaagatccatgaaatgagcttcacccatggcgtggcc
gatgctccgctgaaggttacgggcgacgcgccgaatgaaaccggcacggaagtgagcttc
atgccgagcaccggcaccttcaccatgacggagttcgactacggcacgctggagcatcgc
cttcgtgagctcgccttcctgaattcaggcgtccgcatcctgctgaccgacaagcgccat
tccgatatcaagcaggaagagctgcgttatgacggtggcctcgaggctttcgtcgcttat
ctggaccgcgccaagaagtcgctcgtcgacaagccggttgccatccacggcgaaaaggac
ggcatcaccgtcgaagtcgcgatgtggtggaacgacagctatcatgagaacgtgctctgc
ttcaccaacaacatccctcagcgcgacggcggcacgcatatggccggcttccgcgcggcg
ctgacgcgccaggtcgtttcctatgccgacagttccggcatcaccaaaagggaaaaggta
acgctgcagggcgaagattgccgcgaaggcttgacggcggttctgtcggtcaaagtgccg
gatccgaaattctcctcgcagaccaaggataagctcgtttcctcggaagtccgtcctgtt
gtcgaaagtctcgtcaacgaggcgttgagcacctggttcgaagaacatccgagcgaagcc
aaaatcctcgtgggtaaggtcgtcgaggcagccgccgcacgcgaagcggcccgcaaggca
cgcgagttgacccgccgcaagggcgcactcgatatcgcttcgctgccgggcaagcttgct
gactgctccgagcgcgatccgacaaaatccgaagtcttcctcgtcgagggcgattctgcc
ggcggttcggccaagcagggccgctcgcgcgagaaccaggcgatcctgccgctgcgcggc
aagatcctgaacgtcgaacgtgcccgtttcgacaagatgctgtcgagccaggaaatcggc
acattgatcacagcgctcggtaccggcatcggcaaggacgagttcaatgtcgaaaagctg
cgctaccacaagatcatcatcatgaccgacgccgatgtcgacggcgcccatatccgcacc
ctgctgctgaccttcttcttccgccagatgccgcaactgatcgagcgcggtcatctctat
atcgcccagccgccgctctataaggtctcgcgcggcaagtcggtgcagtatctgaaggac
gagaaggcgctggaagaatatctcatcagccagggcctggaagatgcttcgctgaggctc
ggcagcggcgaagttcgcgccggccaggatctgcgcgaggtcatcctcgatgctctgcgt
atgcgcgcgctgctcgacaatctccattcgcgctacaatcgttccgccgtcgaacaagcg
gccattgccggcgccctcaatgccgagctcgccagcgacccggccagagcgctggcgctg
gcaaacgaagtggctgggcgcctcgacatcatcgccgaggaaaccgagcgcggctggcgg
ggcgatgtgacaaccgatggcggtctgcgcctcgagcgcatggtccgcggcgtcaaggaa
ctcgtcgtgctcgacatggccctgatcggttcctcggatgcccgtcacatcgaccagctg
acggcacgcctcaaggaaatctatcagacgccgccgtcgctgcatcgccgcgaaggcgac
gtcgaaatctccggcccgcgtgccctgctcgacgcgatcttcgcaagcgggcgcaagggt
ctcaccatgcagcgctacaagggtcttggcgagatgaatgccgagcagctctgggaaacg
acgctcgatccgaacgttcgctcgctgctgcaggtcagggtcaacgacgccactgacgcc
gatggtctcttcgcccgcctgatgggtgacgaagtcgagccgcggcgcgaattcatccag
gagaatgcgctgagcgttgcaaacctcgatatctaa
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