Rhizobium brockwellii: RLCC275e_22015
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Entry
RLCC275e_22015 CDS
T09359
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rbw
Rhizobium brockwellii
Brite
KEGG Orthology (KO) [BR:
rbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbw03400
]
RLCC275e_22015 (addA)
Enzymes [BR:
rbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RLCC275e_22015 (addA)
DNA repair and recombination proteins [BR:
rbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RLCC275e_22015 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
DEAD
nSTAND_NTPase5
NPHP3_N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QJX07505
LinkDB
All DBs
Position
complement(4471029..4474580)
Genome browser
AA seq
1183 aa
AA seq
DB search
MSDVTALPNDDDPGAWIGWTTIQQAIASDPLRSAWVSANAGSGKTHVLTQRVIRLLLSGA
RPSAILCLTYTKAAASEMSNRVFERLAEWVVLDDEDLSRRITQIEGTAPDGLKLAEARRL
FAKALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAAVALLSDARRALLTAT
APEEDNALAEAFAYVLNLGDESGLENLLGDIVANRNAIRRFTATAEQQGGVEMVLRKRLG
LTVGDTEDRIAAQYWPLPALSGGTLELYLSLADKKGGAKAQEVAYGLRLAGRERDDARRA
EILEKIFLTVKGEPKADSQFLVKAMLTEAPQLAEAIAIARAHVAASRDRLKLMRMYGATH
AALVLADRLNHDYEELKKQRSQLDFEDLITRTADLLTKSGVGPWIHYKLDRGIDHILVDE
AQDTSPIQWSVIQSLAEDFFSGESARPIVRTLFAVGDEKQSIYSFQGARPERFSEESDRT
RRRVSDSGQSFSSVRLPLSFRSTADVLEAVDHIFKTPENARGLSALGEPVVHRSSRIGHP
GAVDLWEMVAPEAVVKEEDWTAPFDATPESAPAAILARRIAHAIGTLVGRETIVDKGKER
LIEAGDILVLVRKRDAFVNALTRALKRRGDIPVAGADRLVLTSHIAVQDLLALGRFLLLP
EDDLSLTAVLKSPLFDLSEDDIFAIAALRGDNQSVWSHLKSFAADGIERFRAAVERLELF
LRQSRSLSVHDFYARVLGSYGGRRQFLARLGTEVSDILDEFLTFTLDHESSGLPGLQSFI
STLELEAPVMKREQDKGRNEVRIMTVHASKGLEAPIVFLVDGGSKAFTHTHLPKLRLIET
GLDEPPMPVWVPVSDLANSLTQDDATRIQMLAEEEYRRLLYVAMTRAADRLVVCGYRGVR
VNNDTWHMMISTALRDDHPHVEATTFSGPDGEWPGIKWRVPQVERSFERVDRSEERGSDQ
TLPDGLLRPLPPQAELPRPLSPSGAGTIVDEDEGGLLVVSPLFGERVRSDHSLEKGRLIH
RMLQALPEIPLTERPDAASRYAERAARFWPEAERRKLVDSVLKLLDEEGLQAVLGAQAQP
EVSIMGTLTLEDRRYAVSGRIDRLAVLADRVVILDYKTNRVPPASEEAIPFAHRAQLAIY
REILTPLYPDKRIDCMLVYTENASLFTLSEKALGLALAAVKTK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgtgaccgcccttcccaacgacgacgatccgggcgcctggatcggctggacg
accatccagcaggccattgcctcggatccactgcgttcagcatgggtctcggccaatgcc
ggttccggcaagacacatgtgctgacacagcgcgtcatccggctgctgctatcaggtgcg
cggccttccgccattttgtgcctcacctacaccaaggctgcggcgtcggaaatgtcgaac
cgcgtcttcgaacgactggcggaatgggtggtgcttgacgatgaagacctcagccggcgg
atcacacagatcgagggtacggctcccgacggactgaagcttgccgaggcccgccggctg
tttgccaaggcgctggagacccccggtggactgaaaatccagacgatccatgccttttgc
gaggcactgctgcatcaattcccgttggaggccaacgttgccgggcatttctctgttctc
gacgatcgcgcggcggtggcgctgctttccgatgcgcgccgggcgctgctgacggcaacg
gcgccggaggaagacaacgcccttgccgaggcgttcgcctacgtgctcaatctcggcgac
gaatccggactggagaatctgctcggcgacatcgtcgccaaccgcaatgccattcgtcgt
ttcacggcgacagccgaacagcaaggcggcgtggaaatggttctgcgcaaaagacttggc
ctaactgtcggcgatacggaagaccggatcgcggcgcaatattggccattgcccgcgctt
tcgggcggcacgctggagctttatctctcgctcgccgacaagaaaggcggcgcgaaggcg
caagaggttgcctatggcctcaggctcgccgggcgggagcgcgatgacgcaaggcgcgct
gagatcctcgagaaaatctttctgaccgtcaagggcgagcccaaggcggactcgcaattc
ctcgtcaaggccatgcttaccgaggcaccgcagctggcggaggccatcgccattgcccgc
gcgcatgtcgcagcaagccgcgaccggctgaagctgatgcggatgtacggcgccacgcat
gcagcgctcgtgctcgccgaccggctgaatcacgactatgaggagctgaagaagcagcgc
agccagctcgacttcgaggacctgatcacccgcaccgccgacctgctgacgaaaagtggc
gtcggcccctggatccattacaagctcgatcgcggcatcgatcatatcctcgtcgacgaa
gcccaggataccagcccgatccagtggagcgtcatccagtcgctcgccgaagatttcttc
tccggcgaaagcgcccggccgatcgtgcgcacgctatttgccgtcggcgacgaaaagcag
tcgatctattccttccagggggcgcgccctgagcgtttttccgaggagagcgaccggacg
cggcggcgcgtttccgacagcgggcagagtttttcctccgtgcggctgccgctgtcgttc
cgttcgaccgccgacgttctcgaggccgtcgaccacattttcaagacacccgagaacgcg
cgcggcctcagcgcgctcggcgaaccggtcgtgcatcgttccagccgcatcggacatccc
ggcgccgtcgatctctgggagatggttgcgccggaagcggtggtgaaggaggaggactgg
acggcgcccttcgacgcgacgccggaaagcgcgccggccgcaatcctcgcacggcggatc
gcccatgcgatcggcacgctcgtcggccgcgaaacgatcgtcgacaaaggcaaggagcgc
ctgatcgaggccggcgacatcctggtgctggtgcgcaagcgcgacgccttcgttaacgcg
ttgacgcgcgcgttgaagcggcgcggcgatattcccgtcgccggtgcggacaggctggtg
ctgaccagccatatcgccgtgcaggatctgctggcgctcggccgtttcctgcttctgccg
gaagacgatctttcgctcaccgccgtgctcaagagcccgcttttcgatctctcggaggat
gacatctttgcgatcgccgcgttgcgcggcgacaatcagagcgtctggagccatctcaaa
agcttcgccgccgacggcatcgagcgtttccgcgctgccgtcgagaggctggagctgttt
ctccggcagtccaggagcctttcggttcacgatttctatgcgcgcgtgctgggcagctac
ggcgggcggcggcaattccttgcccgtctcggcaccgaggtcagcgatatcctcgacgaa
ttcctgaccttcacgctcgaccatgagagctccggccttcccgggctgcaatccttcatc
tcgacgctggagctcgaagccccagtaatgaagcgcgagcaggacaagggacgcaacgag
gtgcggatcatgacggtgcatgcctccaagggtctggaagcaccgatcgtttttctcgtc
gacggcggttcgaaggccttcacccatacccatctgccgaagcttcgcctgatcgagacc
ggcctcgacgagccgccgatgcccgtctgggttcctgtctccgatctcgccaattcgctg
acgcaggacgatgcgacgcgtatccagatgctggcggaagaagaataccgccggttgctc
tatgtcgccatgacgcgcgccgccgaccggctggtcgtctgcggctatcgtggcgtgcgc
gtgaacaacgacacctggcatatgatgatttcgacagcactgcgcgacgaccatccgcat
gtggaggcgaccacattctccggtcccgatggggaatggccaggcatcaaatggcgtgtg
ccgcaggtggaacgaagcttcgagcgtgtcgatcgcagcgaagagcgcggcagcgaccag
accctgccggacggcctgttgcggccattgccgccgcaggctgagcttcctcggccgctc
agcccttccggcgccgggacgatcgtcgatgaagacgagggcggcctgctggtggtctcg
ccgctgttcggtgagagggtgcgcagcgatcactcactggaaaagggcagactgatccat
cgcatgctgcaggcgcttcccgaaattccgcttaccgagcgacctgatgcggcgagccgc
tatgccgaacgggcggctcgattctggccggaagccgagcggcgcaagcttgtcgattcg
gttctgaaactattggacgaggaaggcctgcaggctgtcctcggtgcgcaggcccagcca
gaggtttcgatcatgggaacattgacgctcgaagatcggcgctatgccgtctccgggcgc
atcgaccggcttgccgtccttgccgatcgcgtcgtcattctcgactacaagaccaatcgg
gtgccgccggcatcagaggaggctatccccttcgcgcaccgggcgcagctggcgatctat
cgcgagatcctgacgccgctctatcctgataagcgtatcgattgcatgcttgtctatacc
gagaacgcctcgctcttcacgctgagcgaaaaggcgctcggtttggcgcttgcagcggtc
aagacaaagtga
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