Rhizobium brockwellii: RLCC275e_22020
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Entry
RLCC275e_22020 CDS
T09359
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rbw
Rhizobium brockwellii
Brite
KEGG Orthology (KO) [BR:
rbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbw03400
]
RLCC275e_22020 (addB)
Enzymes [BR:
rbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RLCC275e_22020 (addB)
DNA repair and recombination proteins [BR:
rbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RLCC275e_22020 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QJX07506
LinkDB
All DBs
Position
complement(4474573..4477764)
Genome browser
AA seq
1063 aa
AA seq
DB search
MAERHQPRITTIPAGLSFLKTLATTLCDGRLTPIFRHDADDPLSLAKVTIYLPTRRAVRV
LRSEFVDLLGGRSAILPVIRPLGETDDDSGYFDEALPATIDLAQPLSNIARLLELARLIL
AWRNKLPEIVRHIHSDSPLVAPASPADAIWLARNLAELIDSIETEDLDWSELSKLDTGDY
AAWWQLTAEFLQIASAFWPERLSELGKSSPARHRNAILRAEASRLSATKPAGPIIIAGST
GSVPATADLIAAVAHLPEGVIVLPGLDLSMPEGHWQMVAPEPAPGQHASPASRSHPQYGL
SVLLKRLKLTRADVTLLDRPEADLERRAEILSRALAPAEATSDWGAWKNGLPAGALTSAF
SDISLIEAANEREEATAIAIALRLALERPGQDSESRAALITPDRNLARRVMAELSRFGIL
ADDSAGTPLSAMPQGTLLQLLLEAALRPGDPVAIVSLLKHPLARFGLERDALISATEALE
LLALRGGVAEVDISTLESLLTHQLAEQALDRHAPQWRKALSPEAAEAAFDLVRRVAQATE
PLASALMRHRPEDRGRTVRFTLSEWAERTGRSLEAVAVDPQGNLADLWSNEAGDALAALL
SEVIDTDGQMEADGPQWIDIMAALAAGHAVKPRALSHPRLFIFGTLEARLQSVDTLILGG
LNEGTWPGQTANNPFIPRMMKTEIGLEPPERRIGQLAHDFEMANGTRHLIYSRALRQGST
PTVASRWLQRLLALGGEAFEAELKGRGNRFLQWAALIDRGDAQAPAQRPSPKPPLKLQPK
SYSFSEVGRLRRDPYAIYARRVLRLDPVDPFNRDPGAAERGTLYHKIIDRFIREPHIAGT
PDAAAAMEHVLSELFDMEKLPPHIDAVWRPRFRAVARAFLEWEAGRRHGILKTLTEVRGG
MELEPINIRLTGVADRIDVTGPHSADIIDYKTGYNPSPAQARVLLDPQLALEAAALSAGA
FRDAGSLVPQDLLYVRLRPGSRFQVDTVNNESSARSDKAKSAMDLAAESIDQLVKFVGLL
QSNERGFTSRLIPAQQFDFGGDYDHLARVSEWSTAETEEGGDE
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggcaccagccacgcatcaccacgatccccgcaggcctctccttcctgaaa
acgctggcgacgacactgtgcgacggccgattgacgccgattttccggcatgacgccgat
gatccgctatcgcttgccaaagtgacgatctacctgccgacccggcgcgccgtgcgtgtg
ctgcggtcggaattcgtcgacctgctcggcggccgctcggcgatcctccccgtcatccgt
ccgctgggcgaaaccgacgacgatagcggctatttcgacgaggcgctgccggcaacgatc
gatctcgcccagccgctgtcgaatatcgcccgtctgctggagcttgcgcgcctgatcctc
gcctggcgaaacaagctgccggagatcgtccgccacatccactcggactcgccgctcgtt
gcgccggcaagcccggcggatgcgatctggctcgcccgtaacctggcggaattgatcgat
tccatcgagacggaggatctcgactggtcggaattgtcgaaactcgacaccggcgactat
gccgcctggtggcagctgacggcggagttcctgcagatcgccagcgcattctggccggag
cggctgtccgaactcggcaaatcctcgccggcgcggcacagaaacgccattctccgggct
gaagcaagccggctttctgcgacgaaaccggccggaccgatcatcatcgccggttcgaca
gggtccgttcccgccaccgccgatctcattgccgccgtcgcccatctaccggaaggtgtg
atcgtgcttccgggtctcgatctctccatgcccgaagggcactggcagatggtcgcgcca
gaaccggcgcccggccaacacgccagtcccgcaagccggagccatccgcaatatggtctg
tcggtgctgctcaagcggctaaagctgacacgcgccgatgtcacgctcctcgacagaccg
gaggccgatcttgagcggcgcgccgaaatcctgtcgcgggcccttgccccggcggaggcg
accagcgactggggggcgtggaagaacggcctgccggccggcgcgctgacttcggccttc
tctgatatttcgctaatcgaagcggccaatgagcgcgaggaagcgaccgcaattgccatc
gcgctccgccttgcgctggaaagaccgggacaggacagcgagagccgggcagcactcatc
actccggaccgcaatctcgctcggcgggtgatggccgagctttcccgcttcggcatcctc
gccgacgattcggcgggtacgccgctttcggccatgccgcagggcaccttgctgcaattg
ctgctggaggcggcgctgcggccgggcgatccggtggcgatcgtctcgctgctcaaacat
ccgcttgcccgcttcggcctggaacgcgacgccttgatttccgccacagaggctctcgag
ctgctggcactgcgcggcggggtggcagaggtggatatcagtacgcttgaatcgctgctc
actcaccaacttgccgaacaggccctggacaggcacgcgccgcaatggcgaaaagcgctt
tcgcctgaggccgccgaggccgcattcgacctcgtccggcgggtcgcacaagcgaccgag
ccactggcttcggcgctgatgcggcaccggccggaagatcgcggaagaacggtgcgcttc
acattgtcggaatgggcggagcgcaccggccgttcgcttgaagcggtcgcggtcgatcca
caaggcaatctcgccgatctctggtcgaacgaagcaggagacgccctcgccgccctgctc
agtgaagtgatcgacacggacggccagatggaggccgacggaccgcaatggatcgacatc
atggcggcgctcgccgccggtcatgcggtgaagccgcgagcgctcagccatccgaggctc
ttcatcttcggcacgctggaagcccgcctgcagagcgtcgatacgttgatcctcggcggc
ctgaacgaaggcacctggccgggacagaccgccaacaaccccttcattccgcgcatgatg
aagacggagatcgggctcgagccgccggagcggcgcatcggccagctggcgcatgatttc
gagatggcaaacggcacgcgccatctgatctattcgcgcgcgctgcgccagggctcgacg
ccgaccgttgcctcgcgttggctgcagcggctgctggcgctcggcggagaggcattcgaa
gcggaattgaagggacgcggcaaccggttcctccaatgggccgctctcatcgatcgggga
gatgctcaggcgccggcgcagcgcccctcgccgaaaccgccgctgaagctgcagccgaaa
tcctattcctttagtgaagtcggccggctgcgccgagatccctatgccatctatgcccgc
cgtgtcttgcggctcgaccccgtcgacccgttcaatcgcgatccaggggcggccgaacgc
ggaacgctctaccacaagatcatcgaccgtttcatccgcgagcctcacatcgccggcacg
ccggatgcggcagcggcgatggagcacgtcctttccgagcttttcgacatggaaaagttg
ccgccgcatatcgatgccgtgtggcggccgcgctttcgcgcggtggcccgcgccttcctc
gaatgggaagctggacgccggcatggcatcctgaaaaccctgacggaggtacggggcggt
atggagctggagccgatcaatatccggcttaccggcgtcgcagaccggatcgacgtcaca
ggaccacactcggccgacatcatcgactacaagaccggctacaatccctcaccggcgcag
gcccgcgtgctgctcgatccgcagcttgcgcttgaagcggccgccttgagcgccggtgcc
ttccgcgatgccggcagcctcgtgccgcaggaccttctctacgtgcgtctgcgacccgga
agccgcttccaagtcgatactgtcaacaacgagagctcggcccgtagcgacaaggcgaaa
tcggcgatggacctcgccgccgaatcgatcgaccagctggtcaaattcgtggggttgctg
caatccaacgaaagaggctttacctcgcggctgatcccggcccagcaattcgatttcggc
ggcgactacgatcatctcgcccgcgtctccgaatggtcgacggccgaaaccgaagagggc
ggtgatgagtga
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