Rhizobium brockwellii: RLCC275e_23355
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Entry
RLCC275e_23355 CDS
T09359
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rbw
Rhizobium brockwellii
Brite
KEGG Orthology (KO) [BR:
rbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rbw03016
]
RLCC275e_23355
Enzymes [BR:
rbw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
RLCC275e_23355
Transfer RNA biogenesis [BR:
rbw03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
RLCC275e_23355
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Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Thioredoxin_12
Motif
Other DBs
NCBI-ProteinID:
QJX07751
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All DBs
Position
complement(4754107..4754715)
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AA seq
202 aa
AA seq
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MNQISFDFEDGRSRRGRPGENHNGGHRLFFALCPPAAVERQAASIADDYGKTFSLSAKPR
LTTLHMTIIGIDDYEELPEDAVFAARQAGATVESAPIAITFDRIMSFRREGKARPLVLYG
EGGLKPLTRLHVQLGVGMHNAGLRHNISRDFTPHMTLLYDCKTVPPARLDTPVSWTASEF
LLIHSLLGKTEYRIIDRWPLLG
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaatctccttcgacttcgaggatgggcgaagtcggcgcgggcgaccgggcgaa
aaccataacggcggacaccggcttttcttcgccctctgtccgcctgcggcggttgagcgg
caggcggcatcgatcgccgatgactatgggaagactttctctctttcggcaaagccacgg
ctgacgacactgcatatgacgatcatcggcatcgacgattatgaagaattgcccgaggac
gcggtctttgcggcgcgccaggccggcgccacggtggagagcgcgccgattgcgatcact
ttcgacaggatcatgagcttcaggcgggaaggtaaggcgcggccgctcgtgctttacggc
gaaggcgggctgaaaccgctcacccgactgcatgtccagctcggtgtcggcatgcacaat
gccggactgcggcacaatatcagccgcgatttcacaccgcatatgacgctgctctacgac
tgcaagaccgtgccgccggcgaggctcgacacgcccgtttcatggacggcgtccgaattc
ctgctcatccacagtcttctcggaaaaaccgaatatcggatcatcgatcgctggccactg
ctcggctga
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