Rhizobium brockwellii: RLCC275e_31345
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Entry
RLCC275e_31345 CDS
T09359
Name
(GenBank) DUF4082 domain-containing protein
Organism
rbw
Rhizobium brockwellii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4082
DMFA2_C
He_PIG
Cadherin_4
Big_9
Mo-co_dimer
Motif
Other DBs
NCBI-ProteinID:
QJX09485
UniProt:
A0A6M5ZVF2
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All DBs
Position
pRltCC275eD:complement(159964..166989)
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AA seq
2341 aa
AA seq
DB search
MYRNARRWTSRSLLVDSLVSRWLTAGGEPRPRKPGERREDSAQLAASVQTADGNKYGTLA
DNPHNNAALDEHDAEHRVSVIGDPDGRADITRVSPPLPDAFTTISEMGIRHDEIAASLLP
AHTPGFAGFERNAKGVAFGAQPSLYHAGAGMSLIGDDPLASYLSQSPAPSVSGQGSAAVT
GERAHSGKVVILESSPSAQATAQHAGANSLAFGMPFGVCGCGYYTSPTRILDWAHGGSML
QPDGQLPGTRLTEGPDYAATIKRAIGASVSDPLLDRNLSPLSGWRGTATWTDSTILNGSL
PGGGEIGTGTGTTKGIGSLSGSVTTPPSTQRSLTTQNLSAAAAAASNAIVLENQKQGNPE
SEWGIDGAGSTNIEGFATDISVDNGKTVSFKINTNSNNYRIDIYRLGYYGGMGARKVATM
QHTGVQNQPSPLRNATTGTVDAGNWAVSASWTVPDDAVSGVYIAKLVRQDGTSGENQIPF
IVRDDDSHSDIVFQTADETWQAYNGWGGANFYGGNGPATGQGAGRAYAVSYNRPIATRGG
VGTYAGPQDYLFGAEYAGIYWLEQNGYDVSYMSGVDVDRYGSLLLNHKTYVDAGHDEYWS
GQQRTNVEAARDAGVNLMFWSGNEVYWRTRWGNAYSADGTPYRTLISYKETWAPGTSIDP
SNEWTGTFRDPRLSPPAVGGGNPENSLTGQLFKVDDVGNNLAAITVGYDDANLRFWRNTS
VANLQPGQTATLTKNYLGYEWDEATDNGFDPAGLVKLSSTTLPVSTYLLDYGNTTGSATA
THNLTLYRAPSGALVFGAGTVYWTWGLSDNHDNQATPTDPRVQQAMVNLLADMGIQPGTL
QSGLVATTGSTDHVAPTSVITVPATAAVGSTVTITGTAADTGGGVIAGVEVSTDNGASWH
PATGDENWTYTWSPQTAGTYTIRSRAVDDNINLETPSVGRTVTVTGPTYTSLFGSATPAV
VNTGDTSAVELGVKFQTSAAGTVTGIRFYKGSQDTGTHTGSLWSSTGTRLATLTFTNESA
SGWQIAYFTSPVALTAGQTYTASYHTNTGHYSTTADYFISNVTSGPLTAPASGNGVYTYG
SASLYPTSTFQSTNYWVDVMFTTSASNTTPTAVADAGDATEKGGVANGSGGVVASGNVLT
NDTDADAGDTKTVTAVVFGATSGTLGTALNGTYGSLVLSASGVYSYAVNESNTAVQALRQ
STNTLSDVFSYTMRDAAGATATASLTVTIHGANDAPVLAVQTAGQNATVGSAFSFVLPTT
TFTDVDSGETLAYTATAADGTALPTWLSFNATTRTFSGTPTTSGTYGVKVTATDLGGLAA
NESFNIAVSTPGNTPPTAVADVGDATEKGGVANGSGGVVASGNVLTNDTDPNAGDTKTVT
AVGFGATSGTLGTALNGTYGSLVLSASGVYSYAINEASAAVQALRQSTNTLSDVFSYTMR
DTGGATATASLTVTIHGANDAPVLAVQTAGQNATVGSAFSFVLPTTTFTDVDSGETLAYT
ATAADGTALPAWLAFNATTRTFSGTPTTSGTYGVKVTATDLGGLAANENFNITATAAPVT
YSLFNASSTPTQTNLNDGQQLEVGVKFQSNVVGDVTGIKFYRSANDNGQNVVDLWTTTGT
KLATATFTNTTASGWQTVNFTTPVTIAANTTYVASYHTTGAYVATDNFFTTTVTSGPLTA
STSGNGVYIYGGSATAGIFPNATYNAANYYADVVFRPASTTPNTTPTAVADAGDATEKGG
VANGSGGVVASGNVLTNDTDADAGDTKTVTAVVFGATSGTLGTALNGTYGSLVLSASGVY
SYAINEASAAVQALRQSTNTLSDVFSYTMRDTGGATATASLTVTIHGANDAPVLAVQTAG
QNATVGSAFSFVLPTTTFTDVDSGETLAYTATAADGTALPTWLSFNATTRTFSGTPTTSG
TYGVKVTATDLGGLAANESFNIAVSTPGNTPPTAVADVGDATEKGGVANGSGGVVASGNV
LTNDTDPNAGDTKTVTAVGFGATSGTLGTALNGTYGSLVLSASGVYSYAINEASAAVQAL
RQSTNTLSDVFSYTMRDTGGATATASLTVTIHGANDAPVLAVQTAGQNATVGSAFSFVLP
TTTFTDVDSGETLAYTATAADGTALPAWLAFNATTRTFSGTPTTSGTYGVKVTATDLGGL
AANENFNITATAAPVTYSLFNASSTPTQTNLNDGQQLEVGVKFQSNVVGDVTGIKFYRSA
NDNGQNVVDLWTTTGTKLATATFTNTTASGWQTVNFTTPVTIAANTNYIASYHTTGAYVA
TDGFFANAVTNGPLTAQSSAVAGGNGVYGYGGSATAGLFPTNSFDSANYYADVVFRPQLV
G
NT seq
7026 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcaacgctcgtcggtggacctcgcgttcactcctggttgattcgttggtctcc
cgatggttgactgccggcggagagccaaggccacgcaaacctggcgaaaggcgcgaggat
agtgctcaacttgcggcatccgtgcaaactgcggatggaaacaagtatggtacccttgcc
gacaatccccacaacaacgcggcgctcgacgagcatgacgctgaacatagagtgagcgtg
atcggcgacccggacggtcgggccgatatcacccgcgtatcgccgcccttgcctgacgct
ttcacaacgataagcgaaatgggaattcgacacgatgagatagccgcgtctctgttgccc
gcccatacgcctggttttgcaggtttcgagcggaacgcgaaaggagttgcatttggggct
caaccgtccctttatcacgccggcgctggaatgagcctcataggcgacgatcctctggct
tcctatctgtcgcaaagtcctgcaccgtcagtttcggggcaaggttctgctgcggtgacg
ggcgagcgtgcgcactcgggtaaagtcgtcattctcgaatcgagcccgtcagcgcaggcg
actgcgcagcatgctggcgctaattcgctggcatttggcatgccctttggtgtgtgcgga
tgcggctactatacctcccctacgcggattctcgattgggcccatggcggctccatgctt
caaccggacggtcaattgccggggaccaggctgaccgagggaccggactatgcagcgacg
atcaagcgggccatcggcgcctcggtcagcgatcctcttctcgatcgcaatttgtcccct
ctctcgggctggcgcgggaccgcaacgtggacggattcgacgatcttgaacggatcgttg
cccggtggcggagaaatcggaacgggaacgggcacaaccaaaggtataggttccctttcc
ggctctgtgacgacgccaccttccacacagcggtcgctgacaacgcaaaatctgtcggcc
gctgcggcggcggccagcaacgcgatcgtcctggaaaaccagaagcagggtaatccagag
agcgagtggggcatcgacggtgcgggtagcaccaacatcgaagggtttgcgaccgacatc
agcgtcgacaacggcaagacggtcagcttcaagatcaataccaattccaacaactaccgg
atcgacatctatcggctcggctattatggcggcatgggcgcgcgcaaggtcgcgaccatg
cagcataccggagtgcagaatcaaccaagtccgttgcgcaatgccacaaccggcacggtg
gatgccggcaactgggccgtttcggcgtcgtggaccgtacctgatgatgccgtctcgggc
gtctatatcgctaagctcgtgcgacaggatggcacctccggcgagaatcagatcccgttc
atcgtgcgggatgacgatagccacagcgacatcgttttccagactgccgacgagacctgg
caagcttataacggctggggtggcgctaacttctatggcggcaacggtccggcgacaggg
cagggggcggggcgggcctatgcggtcagctacaacaggccgatcgcgacccgcggcggg
gtcggcacctatgccggtccgcaggattacctattcggcgccgaatatgccggcatctac
tggctggaacagaacggctatgacgtttcctacatgtcgggtgtggacgtcgaccgttat
ggcagcctgttgctcaatcacaaaacctatgttgatgccgggcatgacgaatactggtct
ggacagcagcggaccaatgtcgaagccgcgcgcgatgcaggcgtcaacctgatgttctgg
agcggtaacgaggtctattggcggacccgttggggcaatgcctacagcgccgacggcacg
ccctatcgcacgctcatctcctacaaggagacgtgggcacccggtaccagcatcgaccct
tccaacgaatggacaggcaccttccgcgacccgcgcctcagcccacctgccgtgggcggc
ggaaacccggaaaactcactgaccggacagttgttcaaggtcgacgatgtcggcaacaat
ctcgccgcgatcacagtcggatatgacgacgccaacctgcgcttctggcgcaatacgagc
gttgccaatcttcagcctggccagacggcaacacttaccaagaactatcttggttacgaa
tgggacgaagcgaccgataacggcttcgatccggctggccttgtcaagctgtcgtcgacg
acgcttccggtcagcacctacttgctcgattacggaaataccaccggcagtgcgaccgcg
acccacaatctgacgctctatcgtgcgccgagcggtgcactggtgttcggcgccggtacc
gtctactggacatggggtttgagcgacaatcacgacaatcaggcgaccccgaccgatcct
cgcgtgcagcaggcgatggtcaatctgctcgccgacatgggcattcagccgggaacactg
caatccggactcgtcgccacaaccggttccacggatcatgttgcaccgacctccgtcatc
acggtacccgcgacagcggccgttggatccactgtgacgattacgggtaccgctgccgac
acgggcggcggtgtcatcgccggcgtcgaagtttccaccgacaacggggcgagctggcat
ccggcgacaggcgatgagaactggacttatacttggtcgccgcagaccgcgggcacctac
acaatccggtctcgcgccgtcgacgataacatcaacctcgaaacaccctcagtggggcga
acggtcaccgtcaccggaccgacttacacgtctctcttcggttcggcgacgccagcggtc
gtcaacaccggcgatacctccgctgttgaactcggggtcaaattccagacctctgcggca
ggcaccgtcaccggcattcgtttctacaagggcagccaggacacgggcacgcataccggt
tcattgtggtcgagcaccggcacgcggcttgcaaccctcaccttcacgaacgagagcgcc
agcggctggcagatcgcctatttcaccagtccggtggcgctgacggccggacaaacctac
acagcgtcttaccacacgaataccggtcactattcgacaaccgccgactacttcatctcc
aatgtgacgagtgggccgctgacggcgccggctagcggcaacggtgtatacacttatggc
agcgccagcctgtatcccacgagcaccttccagtcgacgaactattgggtggatgtgatg
tttaccacgtcggcctcgaacacgacgccgacggcggttgcggatgcgggggatgcgacg
gagaagggtggcgtggccaacggttcgggcggcgtggttgcgagcggcaatgtgctgacc
aacgacaccgatgcggatgccggtgacaccaagaccgtcaccgcggtcgtctttggtgcg
acatcaggcacgctcggcaccgcactgaacggcacctatggcagtctcgtgctcagcgca
tcgggcgtctattcctatgccgtcaacgagagcaataccgccgtccaggcgctgcgccag
tcgaccaacacgctgagcgatgtcttcagctatacgatgcgcgatgccgccggcgccacg
gccacggcaagtctcaccgtcaccatccatggcgccaatgacgcgccggtgctggccgtc
cagacggctggccagaacgccaccgtcggctctgccttctcattcgtactgccgacgacg
accttcaccgatgtcgacagcggtgaaacgctggcctacacggcaacggctgccgatggc
acggcgctgcccacctggctgagcttcaatgccacgacaaggaccttctccggcacgccg
acgacatcaggcacctatggcgtcaaggtgacggcgacagaccttggcggccttgcggcc
aacgagagcttcaacatcgccgtgtcgacgcctggcaacacgccgccgacggcagttgcc
gatgtgggggatgcgaccgagaagggcggggtcgccaacggttcgggtggcgtggttgcc
agcggcaacgtgctgaccaacgataccgatccgaatgccggtgacaccaagaccgtcacc
gcggtcggcttcggcgcgacctcaggcacgctcggcaccgcactgaacggcacctatggc
agtctcgtgctcagtgcatcgggcgtctatagctatgccatcaacgaggccagcgccgcc
gtccaggcgctgcgccagtcgaccaacacgctgagcgatgtcttcagctatacgatgcgc
gacactggtggtgccacggccacggcaagcctcaccgtcaccatccatggcgccaatgac
gcgccggtgctcgccgtccagacggctggccagaacgccaccgtcggctctgccttctcc
ttcgtactgccgacgacgaccttcaccgatgtcgacagcggtgaaacgctggcctacacg
gcaacggctgccgatggcacggccctgcctgcctggctcgccttcaacgccacgacgcgg
accttctccggcacgccgacgacatcaggcacctacggcgtcaaggtgacggcaaccgac
cttggcggccttgccgccaacgagaacttcaacatcactgcaacagcggcgcctgtgacc
tacagcctgttcaacgcctccagcacgccgacccagacgaacctcaacgatggtcagcag
ctcgaggtcggcgtcaagttccagtcgaacgttgtcggtgatgtcaccggcatcaagttc
tatcgcagcgccaacgacaacggccagaacgtcgtcgacctgtggaccacgacgggtacc
aagctcgccaccgccaccttcaccaacaccacggcgagcggctggcagacggtgaacttc
acaacacccgtcaccattgccgccaatacaacctatgtcgcctcctaccacacaaccggt
gcgtacgtggcaaccgacaatttctttaccaccacagtgaccagcggcccgctgaccgcg
tcaaccagcggcaacggcgtatacatttatggcggctccgctaccgcaggcattttcccg
aatgccacctacaacgccgccaattactatgccgatgtggtcttccgtccggcatcgaca
acaccgaacacgacgccgacggcggttgcggatgcgggggatgcgacggagaagggtggc
gtggccaacggttcgggcggcgtggttgcgagcggcaatgtgctgaccaacgacaccgat
gcggatgccggtgacaccaagaccgtcaccgcggtcgtctttggtgcgacatcaggcacg
ctcggcaccgcactgaacggcacctatggcagtctcgtgctcagtgcatcgggcgtctat
agctatgccatcaacgaggccagcgccgccgtccaggcgctgcgccagtcgaccaacacg
ctgagcgatgtcttcagctatacgatgcgcgacactggtggtgccacggccacggcaagc
ctcaccgtcaccatccatggcgccaatgacgcgccggtgctcgccgtccagacggctggc
cagaacgccaccgtcggctctgccttctcattcgtactgccgacgacgaccttcaccgat
gtcgacagcggtgaaacgctggcctacacggcaacggctgccgatggcacggcgctgccc
acctggctgagcttcaatgccacgacaaggaccttctccggcacgccgacgacatcaggc
acctatggcgtcaaggtgacggcgacagaccttggcggccttgcggccaacgagagcttc
aacatcgccgtgtcgacgcctggcaacacgccgccgacggcagttgccgatgtgggggat
gcgaccgagaagggcggggtcgccaacggttcgggtggcgtggttgccagcggcaacgtg
ctgaccaacgataccgatccgaatgccggtgacaccaagaccgtcaccgcggtcggcttc
ggcgcgacctcaggcacgctcggcaccgcactgaacggcacctatggcagtctcgtgctc
agtgcatcgggcgtctatagctatgccatcaacgaggccagcgccgccgtccaggcgctg
cgccagtcgaccaacacgctgagcgatgtcttcagctatacgatgcgcgacactggtggt
gccacggccacggcaagcctcaccgtcaccatccatggcgccaatgacgcgccggtgctc
gccgtccagacggctggccagaacgccaccgtcggctctgccttctccttcgtactgccg
acgacgaccttcaccgatgtcgacagcggtgaaacgctggcctacacggcaacggctgcc
gatggcacggccctgcctgcctggctcgccttcaacgccacgacgcggaccttctccggc
acgccgacgacatcaggcacctacggcgtcaaggtgacggcgacagaccttggcggcctt
gccgccaacgagaacttcaacatcactgcaacagcggcgcctgtgacctacagcctgttc
aacgcctccagcacgccgacccagacgaacctcaacgatggtcagcagctcgaggtcggc
gtcaagttccagtcgaacgttgtcggtgatgtcaccggcatcaagttctatcgcagcgcc
aacgacaacggccagaacgtcgtcgacctgtggaccacgacgggtaccaagctcgccacc
gccaccttcaccaacaccacggcgagcggctggcaaacggtgaacttcacaaccccggtc
acgatcgccgccaataccaattatatcgcctcctaccacaccacgggcgcgtacgtggca
accgatggcttcttcgccaatgccgtcacaaacggtccgttaacggcccaatcaagtgcc
gtcgccggtggcaacggtgtctatgggtatggcggatctgccaccgcaggtctcttcccg
accaactccttcgattcagcgaattactatgccgacgttgtctttcggccgcagctcgtc
ggatga
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