Rhizobium brockwellii: RLCC275e_34315
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Entry
RLCC275e_34315 CDS
T09359
Name
(GenBank) DeoR/GlpR transcriptional regulator
KO
K20271
DeoR family transcriptional regulator, repressor of opine catabolism and conjugal transfer
Organism
rbw
Rhizobium brockwellii
Pathway
rbw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rbw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RLCC275e_34315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rbw03000
]
RLCC275e_34315
Transcription factors [BR:
rbw03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
RLCC275e_34315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_20
GntR
DUF7342
Ribosomal_S25
DprA_WH
YdgH_BhsA-like
DUF4423
HTH_IclR
Mga
Motif
Other DBs
NCBI-ProteinID:
QJX10044
LinkDB
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Position
pRltCC275eA:complement(129252..130061)
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AA seq
269 aa
AA seq
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MIELDHYSKRDTVLTAAQDRQAKIADLLREEQFVAINTLTERFQISLATARRDLGDLEQA
GVLRRTHGGAVSVNQVGQDPTHAARAISRQAEKAAIAAVAAGMIADGDAVFLDAGTTALE
VAKILSARKGLTLISNGLDIVAELSRGEGNTIYSVGGEFTDTNRSYRGPHAESFIRQFNA
DKLILNASSIDLDRGQICTSTPMNASVQKAMIEVSSRVIVVADHSKFTKSSLSVTAKIED
VGVIITDVGTRTIIDTVPEKLRRKFVIAN
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaattagatcactattcgaagagagacaccgtgttaacagccgcccaggaccgc
caagccaaaatcgcagacctgctgcgcgaggagcagtttgtcgcgatcaatacgctgact
gaacgtttccaaatctcgctcgcaacagcccggcgcgatcttggcgacctcgagcaggcc
ggcgtacttcgccggacgcatggtggtgccgttagcgtcaatcaggtcggccaggaccca
acgcatgctgcgcgcgcgatttcgcgtcaagcagagaaggcagccattgctgccgtcgcc
gcagggatgatcgccgacggtgacgcagtctttctcgatgccgggacgaccgcacttgag
gtcgccaagatcctgtcggctcgcaagggtctgacgctgatctccaacggtcttgatatt
gtagccgagctctcccggggcgaaggcaacaccatttattccgtcggtggtgagttcacc
gatacgaaccgctcctatcgcggaccgcatgcggaaagcttcattcgccagttcaacgcc
gacaagctgatcctcaatgccagctcgatcgatctcgatcgcggccagatctgcacatcg
acaccgatgaacgccagcgttcagaaagccatgatcgaagtctcgagccgtgtgatcgtg
gtcgccgaccactcgaagttcacgaaatccagcttgtcggtcacagcaaaaatcgaggac
gtcggtgtgattatcaccgacgtcggcaccaggaccatcatcgacacggtgccagaaaaa
ttgcggaggaagttcgtgatcgcgaactag
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