Rhodobacterales bacterium HKCCA1288: I3V23_03935
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Entry
I3V23_03935 CDS
T09602
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rbx
Rhodobacterales bacterium HKCCA1288
Pathway
rbx03030
DNA replication
rbx03410
Base excision repair
rbx03420
Nucleotide excision repair
rbx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I3V23_03935 (polA)
03410 Base excision repair
I3V23_03935 (polA)
03420 Nucleotide excision repair
I3V23_03935 (polA)
03440 Homologous recombination
I3V23_03935 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbx03032
]
I3V23_03935 (polA)
03400 DNA repair and recombination proteins [BR:
rbx03400
]
I3V23_03935 (polA)
Enzymes [BR:
rbx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I3V23_03935 (polA)
DNA replication proteins [BR:
rbx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
I3V23_03935 (polA)
DNA repair and recombination proteins [BR:
rbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
I3V23_03935 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I3V23_03935 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QPI86139
UniProt:
A0A7S9WGL7
LinkDB
All DBs
Position
complement(797864..800677)
Genome browser
AA seq
937 aa
AA seq
DB search
MSGFSKGCHLHLVDGSAFIFRAYHALPPLTRKSDGLPIGAVSGFCNMLLKMIVENGGSDG
PTHAAVVFDKGSHTFRNDLYDLYKANRDAMPEDLRPQMPLTREATRAFNLACLELEGYEA
DDIIATLARQAREAGGRCTIISSDKDLMQLVGGGVEMFDAMKNARIDAEGVFAKFGVGPE
RVIDVQSLAGDSVDNIPGAPGIGIKTAALLINEYGDLDTLLARAEEIKQPKRREALIEFA
DQIRLSRQLVSLDDQVPLEITLDDLEVKDPEPETLMQFLAAMEFRSLTKRVADHLGVEAP
EIQTSAAAPAPSGGAAPATPEFPAFDHGQYETITTLEALTPWLEAARAQGFIAIDTETTA
LDEMRAELVGVSLATKAGHACYIPLQHRAGGDDLFGSAALVEGQMPLATALDALRSVFED
EAIIKIGQNMKYDAKILARYGIKVAPIDDTMLMSYALHGGLHGHGMDALSARYLDHEPIP
IKTLLGAGKAAITFDLVKIEDAAPYAAEDADITLRLWQVFKPQLHQVQVTRVYETLERPL
VPVLARMEMAGVCVDRDVLSRMSNAFAQKMAALEAEAHELAGEAFNLASPKQLGEILFDK
MGLEGGKKGKTGAYSTGADILEDLAAAGHELPARLLDWRQIAKLKSTYTDALQDHINPET
GRVHTSYVIAGANTGRLASTDPNLQNIPIRSEEGRRIREAFVAPEGRVLVSLDYSQIELR
ILAEIAGIDALKQAFREGQDIHAATASEMFGIPLDQMTSGIRRQAKAINFGVIYGISGFG
LARNLRIPRAEAQGFIDRYFERFPGIRDYMTATKEFAKSHRYVQTLFGRKIHTPDIEAKG
PAAGFAQRAAINAPIQGTAADIIRRAMIRMDQAIADLPATMLLQVHDELVFEVDEGAVDV
LIARARDVMESAASPVLHLSVPLVVDAGQGKNWAEAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatttagcaaagggtgccaccttcatctcgtcgatggctcggcctttattttt
cgggcctatcacgcgctgccgccgctgacgcgcaaatccgatggcctgcccatcggggcg
gtgtcgggcttttgcaatatgcttttgaaaatgattgttgagaatggcggctctgacggg
ccgacccatgcggcggtggtgtttgacaaaggcagccacacgttccgcaatgatctatac
gatctctacaaagccaatcgtgatgctatgcccgaggatttgcgcccgcaaatgccgctg
acccgcgaggccacgcgggcgttcaacctcgcctgtctggagttggagggatacgaggcg
gatgacatcatcgccacccttgcgcggcaagcgcgcgaggcaggggggcgctgcacgatt
atctcatcggataaagacctgatgcagcttgtcggcggtggggtcgagatgttcgatgcg
atgaaaaatgcgcgcattgatgccgaaggtgtttttgcaaaatttggggtcgggcctgag
cgggtgattgatgtgcaatccttggcgggggatagtgttgacaatattcccggcgcgcct
ggcatcggaattaaaacagccgcgcttttgattaatgaatatggcgatttggacacgctt
ctggcgcgggccgaggaaatcaaacagcccaagcggcgcgaagcgctgattgaatttgcc
gatcaaattcgattgtcgcggcaattggtcagtctcgatgatcaagtgccgcttgagatc
actcttgacgatttagaggttaaagaccccgaaccagagacgctgatgcaatttctggcc
gcgatggagtttcgcagcctgaccaagcgtgtcgcggatcatttgggggttgaggcccct
gaaattcagacgagcgccgcggcccctgcgccttcgggcggggcggcccctgccacacca
gaattccctgcctttgatcatggccagtatgagacaatcacaacgcttgaggccctcacc
ccatggcttgaggcggcgcgcgcgcaagggttcattgcgattgataccgagacaaccgcc
ctagatgaaatgcgcgccgaattggttggcgtgtccttggccacaaaggcagggcacgcc
tgttatatcccgctgcaacaccgcgcgggcggggatgatctctttggcagcgccgcattg
gtcgaggggcaaatgccgcttgccacagccctagatgcattgcgttccgtgttcgaggat
gaggccatcatcaaaatcgggcaaaatatgaagtatgacgcgaaaatcttggcccgatac
gggatcaaggtcgcgccaattgatgacacgatgttgatgtcttatgcgctgcatggcggg
ttgcacgggcatgggatggatgcgctctctgcgcgctatctcgatcatgaaccgatcccg
attaaaaccctgcttggggcgggcaaggccgcaatcacctttgacttggtcaagattgag
gatgcagccccttatgcggcggaggatgccgatatcaccttgcgcctgtggcaggtgttc
aagcctcagttgcatcaggtgcaggtgacacgggtttatgaaacgctagaacgcccactt
gtgcccgttttggcgcgtatggaaatggcaggggtctgcgttgaccgcgatgtgctgagc
cgaatgtcaaacgcctttgcgcagaaaatggcggcgctcgaggccgaagcgcatgaattg
gcgggcgaggcgtttaatctggcgagccccaaacagcttggtgaaatcttgttcgacaag
atgggccttgaagggggcaaaaagggtaagacgggggcttattccacgggggcggatatc
ctcgaggatctcgccgccgcaggtcacgaattgcctgcgcgcctgttggattggcgccag
attgccaagctgaaatcgacctataccgatgcgttgcaagatcatatcaaccccgagacg
ggccgcgtgcatacctcctacgtcattgcgggcgcgaatacgggccgtctggcctcaacc
gatccgaacctgcaaaatattcccatccgcagcgaagaaggtcgccgcatccgcgaggcc
tttgtggcccctgaggggcgcgttttggtcagtttggattatagccaaatcgaattgcgc
attttggccgagattgcagggattgatgcattgaaacaggccttccgcgaagggcaagac
attcacgctgcaaccgcatctgaaatgttcggcatcccactggatcaaatgacctctggc
attcgccgtcaggccaaggcaatcaattttggggtcatttatggcatttctggctttggt
cttgcgcgcaatttgcggataccacgcgccgaggcgcaagggtttatcgaccgctatttt
gagcgtttcccgggcatccgtgattatatgaccgcgaccaaggaattcgccaaatcgcac
cgctatgtgcaaaccttgtttggccgcaaaattcatacacccgatatcgaggcgaaaggc
cccgccgcaggctttgcgcagcgcgcggccatcaacgcgccgatccaaggcaccgcggcc
gatattatccgccgcgcgatgatccgcatggatcaggcaatcgcagatttacctgcaacc
atgttgttgcaggtgcatgatgaattggtctttgaggtggatgagggcgcggtggacgtc
ctgattgcccgcgcccgcgatgttatggaaagcgcggcaagccccgttttgcatctatct
gtgccgttggtcgtggatgcagggcagggtaaaaattgggccgaggcgcattga
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