Rhodobacterales bacterium HKCCA1288: I3V23_06090
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Entry
I3V23_06090 CDS
T09602
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rbx
Rhodobacterales bacterium HKCCA1288
Pathway
rbx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I3V23_06090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbx03400
]
I3V23_06090
Enzymes [BR:
rbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I3V23_06090
DNA repair and recombination proteins [BR:
rbx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I3V23_06090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Helicase_C
Zn_ribbon_PriA
MarR_2
AAA_22
AAA_30
DUF7130
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QPI86712
LinkDB
All DBs
Position
complement(1247919..1250111)
Genome browser
AA seq
730 aa
AA seq
DB search
MEADYFTEGALVGVLTAEPLDRVLDYRAPEGGCGIGAFVEVPLGPRRVIGVVWGRGQGGY
DPAKIRKIANVVDVAPMRPEMRQFLERAAQYTFTPLSAMLRLATRAPALGASPQARRLYT
RGASTPARMTDARARVMDVIDEYGGAALSQSELAQAAGVSSAVIKGLVEQGALAQVEAPR
DAPFPALDHHLEGKNLSPDQADISRRLRHKIAAGGFGASLLKGVTGSGKTEVYLEAVAEA
LAKGQQALVLLPEIALSAEFLTRVEARFGARPAEWHSGITMAERRRVWKMVGEGEAQLVV
GARSSLFLPFRDLGLIVVDEEHDASYKQEDGVFYNARDMAVLRGSVAGAQVILASATPSL
ETWANAEAGKYERFDLPARFGASELPQMSAIDMRLEDVPSGQWISPSLAHEVAARISAGE
QSLLFLNRRGFAPITLCRACGVQIACDHCDARMVEHRFQKRLMCHQCGETKDIPETCPAC
GVDGKLTALGPGVERIAEEAQALFPQARVAILSSDLFGSARALKAQIAEIAEGGCDIIIG
TQLVAKGHNFPNLTLVGVVDADLGLHGSDLRAAERSFQLMRQVAGRAGRAEKAGVAMMQT
YQPEHPVITAILANDDEGFWRAEAAMREAAAMPPYGRLAGIVISSPDLAECFDLGNHLAR
HDGPLRQIEAQVFGPAPAPVARVRGRHRVRLLVKAPKGAPIQAALAHWLNGLKYSNKLRL
SVDIDPQSFY
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgattatttcactgaaggggcgcttgttggtgtgctgaccgctgaaccgctg
gatcgcgtgctggattatcgcgcgccagagggtggctgtgggatcggtgcctttgtcgaa
gtgccgcttgggccgcgccgcgtgattggcgtggtttggggccgggggcaggggggctat
gaccctgcaaaaattcgtaaaatcgcgaatgtggtggatgtggcgccaatgcgccctgaa
atgcgccaatttctagagcgcgcggcgcaatacacctttacgcccttgtcggcgatgctg
cgtttggccacgcgcgcgcctgcattgggggcttcgcctcaagcgcgcagactatacacg
cggggggcaagcacgcctgcgcggatgacggatgcgcgggcccgtgtcatggatgtgatt
gacgaatatgggggggccgcgctgtcgcaatccgaattggcgcaggcggcaggggtcagc
agcgcggtcatcaaaggattggtcgaacaaggcgcattggcgcaagtcgaggccccccgc
gatgcgcctttccccgctttggatcatcaccttgagggcaagaacctcagccccgatcag
gccgatatctcacgccgcttgcgccacaaaattgcggcaggcggctttggagctagttta
ctcaagggggtcacggggtcaggcaaaaccgaagtctatcttgaggcggttgccgaggct
ttggcaaaaggccaacaggcgcttgtccttttgcctgagattgccctttctgcggaattc
ctgacgcgggttgaagcgcggtttggtgcgcgccctgccgaatggcattcagggatcacc
atggcagaacggcggcgcgtctggaaaatggtgggcgaaggggaggcgcaattggtggtg
ggcgcgcgctctagcctgttcctgccgttccgagatttgggtttgatcgtggtcgatgaa
gaacatgatgcctcttacaagcaggaagacggcgtgttctacaatgcccgcgacatggct
gttctgcgcggctccgttgcaggcgcgcaggtgatcttggcatcggcgaccccttcgctt
gagacatgggcgaatgcggaggcgggcaaatatgaacgctttgatctgcccgcgcggttt
ggcgcgtctgaattgccacagatgagcgcgattgatatgcgccttgaggatgtgccctcg
gggcaatggatttcaccgagcttggcgcatgaggtggcggcgcgtatttcagcaggtgag
caaagcttgctattcctcaatcgccgtgggtttgcgccgattaccctatgccgtgcttgc
ggtgtgcaaatcgcctgtgatcattgtgatgctcgcatggttgaacaccgctttcaaaag
cggttgatgtgccatcaatgcggcgagacgaaagatattcccgaaacctgccccgcctgt
ggcgttgatggtaagttgacggccttagggcctggggtcgaacgcattgccgaagaggcg
caagccctatttccacaggcgcgcgtggcgattttatcatctgatttgtttggctccgcc
cgcgcgctgaaagcgcagattgctgagattgcagaaggcggatgcgatattattatcggc
acgcaattggtggccaaggggcataatttcccgaacctcaccttggtgggggtggtggat
gctgatcttgggttgcacggctctgacctgcgcgcggctgagcgcagttttcagctgatg
cgccaagttgcaggccgcgcagggcgcgctgaaaaagcaggggtcgccatgatgcagacc
tatcagcccgagcaccccgtgatcaccgccattctggcaaatgatgatgaggggttctgg
cgtgccgaggccgcgatgcgcgaagcggccgcgatgccaccctatggcaggcttgcgggg
atcgtgatctcaagccccgatttggccgaatgttttgatctgggcaatcatctggcccgc
catgatggcccgctgcgtcagattgaggcgcaggtttttggccctgcccctgcgcctgtc
gcacgggtgcgggggcggcatcgtgtgcgccttttggtcaaggccccaaaaggcgcgccc
attcaagctgcgcttgcgcattggctgaacggattgaaatattccaacaagctgcgtctc
tcggtcgatattgatccgcaaagtttctattga
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