Rhodobacterales bacterium HKCCA1288: I3V23_10015
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Entry
I3V23_10015 CDS
T09602
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
rbx
Rhodobacterales bacterium HKCCA1288
Pathway
rbx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I3V23_10015 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbx03400
]
I3V23_10015 (recF)
DNA repair and recombination proteins [BR:
rbx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
I3V23_10015 (recF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
ABC_tran
SbcC_Walker_B
AAA_27
AAA_29
AAA_13
Motif
Other DBs
NCBI-ProteinID:
QPI84909
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Position
2047058..2048134
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AA seq
358 aa
AA seq
DB search
MSAYISNLHLSHFRSHRGLRLSFDGRPVAIYGPNGAGKTNILEAISMLSPGRGLRRAPSE
DLIRRPEVIGWRVAATLQIDDTVHEIITRAEPSSPRQVEIDEKSAPQLALARLLRMVWLV
PSQDRLWIEGAEGRRRFLDRITLSFFPDHGEAVLAYEKSMRDRNRLLKDQVRDAGWYAAL
ERQMMSATEQICANRSAALTRIAAAQEEAKTSFPIADLTLEEGEGFTTPTDLVTLWSDTR
SRDMAAGRTLVGPHRTDLGAIYRVKDAPARQCSTGEQKALLVSLILANARALKQDTGRAP
LVLLDEVAAHLDADRRAALFDEICALNAQAFLTGTGAELFMEFGARAQEVPLGVEAAN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcctatatctcgaatttgcatctgtcgcattttcgcagccatcgtggtttgcgg
ctgtctttcgatgggcggcctgttgcgatttatgggccaaatggggcaggcaagacaaat
atcttagaagcgatttcgatgctgtcccctggtcgggggctgcgccgcgccccgtccgag
gatttgatccgccgcccagaggtgattgggtggcgcgtggcggcgaccctgcagattgac
gacactgtgcatgagatcattacccgcgccgagccaagcagcccccgtcaggtcgagata
gatgagaaatccgcgccccaattggcgcttgcgcgccttttgcggatggtttggctggtg
ccatcgcaagatcggctttggattgaaggagccgaagggcgcaggcggtttttggatcgc
attacgctgagcttctttccagatcatggtgaggcggttctggcctatgaaaaatccatg
cgggatcgcaatcgcttgctcaaggatcaggtgcgcgatgcgggttggtatgcagcgctt
gaacgtcagatgatgagtgccacagaacaaatatgtgccaatcgcagcgccgccttgacc
cgcattgctgccgcgcaagaggaggcgaaaaccagtttccctatcgcagatctgaccttg
gaggagggagagggttttaccacgcccaccgatttggtcacgttgtggtctgatacgcgg
tcacgggacatggcagcagggcgcacgttggttgggccgcatcgcactgatcttggcgca
atttatcgcgtcaaggatgctccagcgcggcaatgctccacgggtgagcaaaaggccctt
ttggtctctctgattttggccaatgcccgcgcgttaaagcaggacacgggccgcgcccct
ttggtgctgttggatgaagtggcggcacatcttgatgcagacaggcgagcagccctcttt
gacgaaatatgcgcgctgaatgcccaagctttcttgacaggcacgggcgcagaattgttc
atggaattcggcgcgcgtgcgcaagaggtgccgctcggagtggaagcggccaattag
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