Rhodobacterales bacterium HKCCA1288: I3V23_10630
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Entry
I3V23_10630 CDS
T09602
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rbx
Rhodobacterales bacterium HKCCA1288
Pathway
rbx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rbx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I3V23_10630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbx03021
]
I3V23_10630
03400 DNA repair and recombination proteins [BR:
rbx03400
]
I3V23_10630
Enzymes [BR:
rbx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I3V23_10630
Transcription machinery [BR:
rbx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I3V23_10630
DNA repair and recombination proteins [BR:
rbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I3V23_10630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
HHH_XRCC3_RpoA
RepD-like_N
Motif
Other DBs
NCBI-ProteinID:
QPI85024
LinkDB
All DBs
Position
2160798..2161814
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWQELIKPTQLVVNPGTDPARKATAIAEPLERGFGLTLGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSVAGVREDVTDIVLNLKGVALRMEVEGPKRLSVTAKGPKVVTAGDISE
SAGIEVLNKDHVICHLDDGADFFMELTVNTGKGYVSADKNRPEDAPIGLIPIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTVKVETDGSVTPEDALAYAARILQDQLQIFVNFDEPEAAG
RQDDDDDLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDIVDWPPDNIEELAKKYEDNF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccataagaattggcaagaactgatcaagccaacccagctggttgtaaaccctggc
accgaccctgcgcgcaaggcaacagcgattgccgagccgcttgagcgtggctttggtctg
acgcttggcaacgcgcttcgccgcgttttgatgagctcgctgcaaggcgcggccattacc
tctgtgcagatcgacaacgtcttgcacgagttttcctcggtcgctggtgtgcgcgaggat
gtaacggatatcgttctcaacctcaaaggcgtggccttgcgcatggaagttgaggggcca
aagcgcctttccgtgaccgcaaaagggcctaaggttgtcaccgcaggcgacatttccgaa
agcgcaggtatcgaagttctgaacaaggatcacgtgatctgtcacttggatgacggcgcg
gatttcttcatggaactgacggtgaacacgggcaaaggctatgtctctgcagacaaaaac
cgcccagaagatgcgccaattggtctgatcccgattgacgcgatctattcgcccgtcaag
aaagtatcctatgacgtgcagccgacccgtgaaggtcaggttctcgattatgacaaactg
actgtcaaagtcgaaacagatggctcggtcacccctgaggatgccttggcctatgctgca
cgtattttgcaggatcaattgcagatcttcgtcaactttgacgagccagaagccgcaggt
cgtcaggatgatgatgatgatctcgaattcaacccactgcttctcaagaaggtggacgag
ttggaattgtcggttcgctctgcaaactgcctgaagaacgacaacatcgtctatatcggt
gatctgattcagaaaaccgaagccgagatgctgcgcacgccaaactttggccgcaaatcc
ttgaacgagatcaaggaagtgctgtctggcatgggtctgcatttgggaatggatatcgtt
gattggccgccagacaatatcgaagagctggccaagaaatacgaagacaatttttga
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