Rhodobacterales bacterium HKCCA1288: I3V23_11105
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Entry
I3V23_11105 CDS
T09602
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rbx
Rhodobacterales bacterium HKCCA1288
Brite
KEGG Orthology (KO) [BR:
rbx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rbx03000
]
I3V23_11105
Transcription factors [BR:
rbx03000
]
Prokaryotic type
Helix-turn-helix
Other families
I3V23_11105
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF
Sigma54_activat
AAA_16
AAA_lid_14
AAA
Sigma54_activ_2
HTH_30
NACHT
AAA_22
ABC_tran
HTH_22
HTH_8
AAA_24
AAA_7
DUF87
RdRP
TsaE
Motif
Other DBs
NCBI-ProteinID:
QPI85103
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Position
complement(2254137..2255954)
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AA seq
605 aa
AA seq
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MRARASLENKGAFAAGAVPEMIADSWHRCLRHGLDPLGEPTDAVLSYGKLRERLEKHERL
LSIVRPELELLSKQIAGTNYLTAFADREGIVLDVIMDNEFKESDCSRSINLGSIWSEEMR
GTNALGLALHAGKTAMVTGGEHFFSKHGGVSCVSTPIFDSKGEIVGLLDASSEVAARQFH
TQALVSLAALNIENRLFVDEHRKDIILQFHPREEYLSTQSVGMISIDQHGNLTGINRRAA
DILNGIETHGEKSFEQVFQNRFSAALKPLMQGDVIRLVDWLNSSYFARLRITRPHARGTI
SRQSVSLSVPAVFSLKASTGRLVIRDEQVADCFRLALRSAKVGAPLAVIGDAGTGKTTFA
QTVHTEINPAKPLIVLDCSMIKFESDGEGLIAEVLGATEKTNFNINSGGTLVLENLAKID
TAAAEKLAHVVNRLLQSKTKSNWLIISTGTAKFVCDKDWLPTVKMSLSGLSQVSLQLPNL
LERTDFSQIAQAMLDKMSEDYRLSTGAIEALKRMPYDQNLNDLDNRLKILMVQCPGGIIR
EEQVIRHLTQSQSKETACPKCIGNTAREAKCNEINRVFRQCNSNVALASRKLGVSRNTVY
SHVTT
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgcgtgcgtctttagaaaataaaggcgcctttgctgctggtgcagttccagaa
atgattgctgacagctggcatcgatgtttgagacatggactggacccgttaggcgaaccg
actgacgcagtactctcctacgggaagttgagagagcgtctcgaaaaacatgagcggcta
ctatcgattgtacggccagaattagagctccttagcaaacaaattgcaggcactaattat
cttactgccttcgccgatcgcgagggcattgttctcgacgttataatggacaatgaattt
aaggagagtgactgctctcgcagtatcaacttgggatcaatttggagcgaagaaatgcgc
ggtacgaacgcgctcggcctagctcttcatgctggcaaaacagcgatggtcactggggga
gaacattttttttcgaaacacggtggagtttcttgtgtctcaactccgatattcgacagc
aaaggtgagatcgttggccttctagatgcttcttcagaagtggcagcacgccagttccat
acccaagcacttgttagcctcgccgccctcaatattgaaaatcgtttatttgttgatgag
catcgaaaagatataatcttacagttccatccacgcgaagagtatcttagcactcagagc
gtgggtatgattagtattgatcaacatggcaacttaactgggataaatcgtcgagcagcc
gacattttgaatggcattgagacgcatggcgaaaaatcgtttgaacaagttttccaaaat
aggttcagcgcagccctaaagcctttgatgcagggagatgttattcgcctcgttgactgg
ttgaactcttcgtattttgcccgcctccgcattacacgccctcatgcgcgcgggactatt
tcaagacagtccgtgtctttaagcgtacccgcagtttttagcctaaaagcttcgacgggg
cgtctagtaatcagagatgagcaagttgcagattgcttcaggcttgcgttacgctcggcc
aaagtcggcgcaccattggctgttattggggatgctgggactggcaagacaacttttgct
caaacggttcacaccgagatcaacccagcaaaaccactaatagttttggactgctcaatg
ataaagtttgagtcagacggtgaaggcttgatagcagaagtattaggcgcgactgaaaaa
actaatttcaatattaattcaggcggtactctagtccttgagaatttagctaaaattgat
acggccgcagcagaaaaacttgcccatgtcgtcaatcgcctgcttcaatccaaaactaaa
tccaactggctgataatctcgactggtacagcgaagtttgtctgcgacaaggattggtta
cctaccgttaagatgtcactttcaggcctttcacaggtgagtctacaattaccaaatctt
ttggaacggactgactttagtcagatagcacaagcaatgttagacaaaatgtctgaagat
tatcgattgtctactggagcgatcgaggcgttgaaaagaatgccctatgaccaaaattta
aacgacctcgataaccgcctaaaaatattaatggtacagtgcccaggtggcatcatccgc
gaggagcaagtaatccgtcacttgactcagtcgcaaagtaaagaaacagcatgcccaaaa
tgcattggcaacactgcacgcgaagcaaagtgtaatgaaatcaacagggtttttcgccaa
tgcaactctaacgtcgcgttggcatcacgaaagttaggtgtgtccagaaatacggtctat
tctcacgtgactacctaa
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