Rhodobacterales bacterium HKCCA1288: I3V23_13090
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Entry
I3V23_13090 CDS
T09602
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rbx
Rhodobacterales bacterium HKCCA1288
Pathway
rbx03420
Nucleotide excision repair
rbx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rbx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I3V23_13090
03430 Mismatch repair
I3V23_13090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbx03400
]
I3V23_13090
Enzymes [BR:
rbx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I3V23_13090
DNA repair and recombination proteins [BR:
rbx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I3V23_13090
MMR (mismatch excision repair)
Other MMR factors
I3V23_13090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QPI85449
UniProt:
A0A7S9WFC9
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All DBs
Position
2659029..2661461
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AA seq
810 aa
AA seq
DB search
MSSSENNTLAATVPLSQRAAALRPMPYLEGLNPEQRKAVETLDGPVLMLAGAGTGKTRAL
TARIAHLISTDRATPRSILAVTFTNKAAREMRERVSAALGHPTEGTAWLGTFHSICVKLL
RRHAELVGLKSNFSILDTDDQIRLLKQLIEAEGIDAKRWPPRMLAGIIDHWKNRAWRPDT
LPAAESGAFNGKGPKLYALYQQRLAALNACDFGDLLLHMVTIFQAHEDVLQQYQRQFAFI
LVDEYQDTNVAQYLWLRLLAQGHSNLCVVGDDDQSIYGWRGAEVGNILRFEADFKGAAVI
RLEQNYRSTGHILKAASAVIAGNSQRLGKELWTEGEDGAPVRLIGHWDGEEEARWIGEEI
EALGIGTRGLRAIGPEEIAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAM
AYFRLVISPEDDLAFERIVNTPKRGLGDKAQATIHEIARRNGVSLLQGAAMAVETGAIGG
KGGKELARFVLQIAHWRNLLREGVVAGPATDDLIERENPEGLSHIELAETILEESGYTAM
WQNDKTPEAPGRLENLKELVKALEQFENLQGFLEHVSLIMDNEQDDGQAKVTLMTLHAAK
GLEYPAVFLPGWEDGLFPSQRAMDEEGMKGLEEERRLAYVGITRAEELCTISFAGNRRVY
GQWQSQMPSRFIDELPEAHVEILTPPGLYGHQSHGMGQSASPVSQMQIASNLPNRAAQAD
AYNSPGWRRLQARQGEYGLSQPRESKRAGFDEAATVPFDMGERVFHQKFGYGAITAIEGD
KLDVAFDKAGVKKVVARFLVAADSAGDLPF
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttctgaaaataacacccttgccgccaccgttcccctgtcgcagagggccgcc
gctctgcggcccatgccctatttggaggggttgaacccagagcagcgcaaggccgtagaa
accttggacggccccgtgttgatgttggcgggcgcaggcacgggcaaaacccgcgccttg
accgcgcggattgcacatttgatctccacagaccgcgccacgccgcgcagtattttggcc
gtaaccttcaccaacaaagccgcgcgcgagatgcgcgaacgcgtcagcgcggcccttggt
catccgaccgaaggcacggcctggcttggcacgttccattcgatctgcgttaaacttttg
cgccgccatgccgaattggttgggctgaaatccaatttctcgattttggacacggatgat
caaatccgcctgctgaaacaattgatcgaggccgagggcattgacgcaaagcgctggccg
ccacggatgttggcgggcatcatcgatcattggaaaaaccgcgcatggcgtcccgatacg
ctgcccgccgctgaaagtggggccttcaacggcaaggggccaaagctatatgcgctttat
caacagcgccttgccgcgttaaatgcctgcgattttggcgatttgctgttgcatatggta
accatctttcaggcgcatgaagatgtgttgcagcagtatcagcgccagttcgcctttatt
ttggtcgatgaataccaagacaccaatgtggcccagtatttatggctgcgtcttttggcg
caggggcattccaatctttgcgtggtgggggatgatgaccaatccatctacggatggcgt
ggggccgaggtgggcaatattctgcgctttgaggcagatttcaaaggtgccgccgtaatc
cgccttgagcagaattaccgctcgacaggccatatcctaaaggccgcctctgcggtgatt
gcgggcaattcgcagcgtcttggcaaggagctgtggacagaaggcgaggacggcgcgcct
gtgcgtctgatcggccactgggatggcgaggaggaggcccgctggatcggtgaggagatc
gaggcgcttggcattggcacgcgcggattgcgcgcgattggccccgaggaaatcgccatt
ctcgtgcgcgccagccatcagatgcgcgcctttgaggatcgtttcctcaccattggtctg
ccctatcgcgtcatcggtggcccgcgcttttacgagcggttagaaattcgtgatgccatg
gcctatttccgcctcgtgatcagccctgaggatgatctggcctttgagcggatcgtgaac
acccccaaacgcgggcttggcgacaaggctcaggccaccatccatgagatcgctcgccgc
aatggcgtcagccttttgcaaggggcggcaatggcggtggaaactggtgcgattggcggc
aagggcggcaaggaattggcccgtttcgttctgcaaattgcccattggcgcaatctattg
cgcgagggggtggttgcaggccccgccaccgatgatctgatcgagcgcgaaaatcccgaa
ggtctgagccatatcgaattggccgaaacgattttggaggagtcgggctacaccgccatg
tggcaaaacgacaaaacccccgaggccccagggcggcttgagaacctcaaggaattggtc
aaggcgcttgagcaattcgaaaacctgcaaggctttctcgaacatgtcagccttatcatg
gataatgagcaagatgatggtcaggccaaggtcaccttgatgactttgcacgcggcgaag
ggtctggaatatcccgcagtctttttgccaggttgggaggacggcctgttcccaagccag
cgtgcgatggatgaagaagggatgaaaggattagaggaggagcgccgcttggcctatgtg
ggtatcacacgggccgaggagctatgcacaatttcctttgcgggcaatcgccgtgtttat
ggccaatggcaaagccagatgccctcgcgctttatcgatgaattgcccgaagcccatgtc
gagattttaaccccgccaggcctttatggtcatcaaagccacggaatggggcagtcagcg
tcacctgtttctcaaatgcagatcgcctcgaacctgccaaaccgcgcagcgcaggcagat
gcctataattcaccggggtggcggcgcctgcaggcgcggcagggggaatatggcctcagc
caaccccgcgaaagcaagcgcgcgggttttgacgaggcggcaacggttccttttgatatg
ggcgagcgcgtctttcaccaaaaatttggctatggggcaattaccgcgattgagggtgac
aagcttgatgtggcttttgacaaggcaggcgtgaaaaaagtggtggcgcgctttcttgtt
gcggcggacagcgcgggcgatctgcccttttaa
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