Rhodococcus pyridinivorans TG9: CEJ39_00025
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Entry
CEJ39_00025 CDS
T05830
Name
(GenBank) IS1380 family transposase
Organism
rby
Rhodococcus pyridinivorans TG9
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Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_1_4
DDE_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
AWZ22785
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Position
complement(2815..4209)
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AA seq
464 aa
AA seq
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MSKSTSPYPRVSASATGTGVVSQAGTVLLLRTAEKTGLAAALTTELAPYRKPLARHDPGK
IVLDLATALAIGGDCLADIAQLRAHPELFGTVASDPTVSRLISVLATDADTALAAIGRAR
ATARSHAWAAAGTSAPDHAIDEAHPLVLDIDATLVTAHSEKEQAAPTFKRGFGFHPLCAF
VDHGTGGTGEPVAMLLRPGNSGSNTAADHITVVQDALAQLPVDPAYRVGKKVLVRIDGAG
GTHGLIEYLTKRRLSYSVGFGLTETMVAALELVPDQAWTPAYDSDGQVRDGAWVTELTGL
LDLSSWPKGMRVIVRKERPHPGAQLRFTDRDGLRLTAFVTNTRRGQLPDLELRHRRRARC
EDRIRTAKVTGLQNLPLHGFDQNRIWLALVQLACELIAWMQMLALTDVAARRWEPKRLRL
RLLSIAGRVARHARRVRLRLAATAPDIDVLVAGLNRLEALPAPA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaagtctacgtccccctacccacgcgtgtccgcatcggccaccgggaccggcgtc
gtgtcgcaggccggaacggtcctgctgctgcgcaccgcggagaagaccggcctcgctgcg
gcgttgacgaccgagctcgcaccgtatcgaaaaccgctggcccgacacgatcccggcaag
atcgtgctcgatctcgcgacagcattggcgatcggtggggactgcctcgccgacatcgca
caactgcgggctcaccccgaactgttcggcacggttgcctccgacccgaccgtctcccgc
ctgatcagcgtgttggccaccgacgccgacaccgcgctcgccgcgatcggacgcgcccgc
gccaccgcccgctcccacgcctgggccgccgccggcacgtcggcaccggaccacgccatc
gacgaagcgcatccgctggtcctcgacatcgatgcgacgctggtcaccgcgcactccgag
aaggaacaggccgccccgacgttcaagcgaggcttcggtttccacccgctgtgcgcgttc
gtcgaccacggcacaggcggcaccggtgaacccgtcgcgatgctgctgcggccgggtaac
tcggggtcgaataccgccgccgatcacatcaccgtggtgcaggacgccctcgcacagttg
ccggtcgacccggcatatcgggtcgggaagaaggtgctggtgcgtatcgacggggccggc
ggcacccacgggttgatcgagtatctgaccaaacggcggctgtcgtattcggtggggttc
ggattgaccgagacgatggtcgccgcactcgaactcgtcccggaccaggcatggaccccg
gcctacgactcggacggacaggtccgcgacggcgcctgggtgacggagttgaccggcctg
ctcgatctgtcgtcgtggccgaaaggcatgcgggtaatcgtcaggaaggagcgcccgcat
ccgggtgcgcagttacggttcaccgaccgtgacggcctacgcctgaccgcgttcgtgacc
aatacccgccgagggcaactcccggatctggagctgcgacatcggcgtcgggctcggtgc
gaggaccggattcggacagccaaagtcaccgggctgcagaatcttccgctgcacggtttc
gatcagaatcggatctggttggcgctcgtgcaactcgcatgtgaactgatcgcgtggatg
cagatgctcgcgttgaccgatgtcgcggcccggcggtgggagccgaagcggctgcggctg
cgattgttgtcgatcgccggtcgcgtcgcccggcatgcccgccgtgttcggctgcggctg
gccgcgacagctcccgatatcgatgtcctcgtggccggcctgaaccggctggaggcactt
cctgcgcctgcgtga
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