Rhodococcus pyridinivorans TG9: CEJ39_03855
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Entry
CEJ39_03855 CDS
T05830
Name
(GenBank) polyketide synthase
KO
K12437
polyketide synthase 13
Organism
rby
Rhodococcus pyridinivorans TG9
Pathway
rby00074
Mycolic acid biosynthesis
rby01100
Metabolic pathways
rby01110
Biosynthesis of secondary metabolites
Module
rby_M00887
Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
CEJ39_03855
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rby01004
]
CEJ39_03855
Lipid biosynthesis proteins [BR:
rby01004
]
Polyketide synthase
Modular PKS
CEJ39_03855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
DUF7080
Thiolase_N
RhiE-like_linker
CurL-like_PKS_C
Abhydrolase_6
Motif
Other DBs
NCBI-ProteinID:
AWZ23428
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Position
804549..809471
Genome browser
AA seq
1640 aa
AA seq
DB search
MTVAQLREWLRNWIVDATGQPVSQISDDRPMEEFGLSSRDAVAMAGEIEELLGVTLNATI
AYQHPTIASLATRIIEGEPEAPAEDDSALYTVGAAAGSKDVAIVGLSTRLPGHVDTPEQM
WELLASGRDGISDLPEGRWSEFENDPAVWESIRNANTRGGYLDDVKGFDAEFFAMSPREV
EMVDPQQRLALELTWEALEHAHIPPSDLKGGSVGVFIGSSASDYMLLAVGDPSAAHPYAL
TGTSTAVIANRVSYFYDFHGPSVTLDTACSSSLVAVHQAVRALRNGEADVALAGGVNMLL
APAGTLGFDELGVMAPDGRIKAFSADADGMIRAEGGGLVVLKRLEDAERDGDDILAVIAG
SAVNQDGRSNGLAAPNPEAQVDVLRRAYRDAQILPSGVDYIEAHGTGTVLGDPIEADALG
RVVGRGREDDKPVLLGSAKTNFGHLESAAGAAGLIKVVLAMQNDQLPPTLNYTAPNPYIP
FDSAHLKVIPEGAKWPRYTGRAVAGVSGFGFGGTNAHVVVREYTGPEGLEASEAEVEVLP
EEIPAAETTEQARELPVLLAVSAAMPSRRRRAAADLADWLETEKGSTTPLADVARTLARR
NHGRSRAIVVASNHGEAIAGLRAVAAGKPAQGVFTADAPASKGAVWVLSGFGAQHRKMAK
QLYLENPVFAAAVDEVDELIYDESGYSMKEKFLDDAQDYDVETAQVGIFTIQIGLAALLR
HHGAEPAAVVGHSMGEAAGAYISGGLSLEDAVRVICSRSRLMGEAESGLTGDDIRLMALV
EYSAAEITDVLPDFPQLEVCVYAAPTHTVIGGPQEQVNAIVARAEAEEKFARVLQTKGAS
HTSQVDPILGELAAELAGIEPHRLKVDLYSSVDQETLYRAGHEGIHDVEYWTKGMRHSVY
FTQAIRQALSDGHTTFVELNANPATLMSVAATAFDAGVQDGQFIQTLKRKEDESLGVLTA
LAQLYVHGQSVDLRTLLPEGDYADLPRTAFLRKPYWVDASIGTSGNGRAPGARVALPDGR
YVWEVQASAVTDAAELVVAAASQVLSDVTLTASIPHTDVPATGTLTTTLTRHPGGASLQV
HANTGDGFTLVHEGVVTSGEPLPAPVAVAAKPAAQAEELPEVVESFGDQWDPNGSQSLDD
RLTLIVAESMGYAPEDLPAEIPLIELGLDSLMAVRIKNRVEYEFDIPQLQLSAVKDASLR
DVAKYLRYAVENREEVAQLAEQQAAEKAAERAAAAEQDDLPEVEDTTAVGEAEQILAEAE
AEAEAEAQTAPETAEPEQESSGVDVPPRDAAERLTFASWAVVTGKSAKGIFNRLPKLDRD
VAEKLAARLTERAEGEITVDDVLSAPTVEQLAETVRQHLESADRIDGLVRTLRPRAEGSD
TVPVFVFHPAGGSTVAYEPLLRRLPAHTPVFGFERTEGPIDTRAQAYLPLIKEIQGDGPY
VLCGWSLGGVLAYAVARLLREEDKDVRLVGLIDTVMAGEKVEDTPDEIRKRWQRYSAFAK
KTYGVDAPLPYDLLAEAGSDEEQIGILMGLLELSGAQIPGGIIEHQRTSWLDNRAIQTAE
LLPYDGKVVLYMADKYHDDAIDLEPAFGTRLPDGGWGEVVADLEVVHVGGDHLQIVDEPY
ISKVGEDLTRKLADIEASRS
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atgacggttgcgcagctgcgcgaatggctgcgcaactggatcgtcgacgcgaccgggcag
ccggtctcccagatctcggacgatcgtccgatggaggagttcgggctgtcctcccgggac
gccgtcgccatggcgggtgagatcgaggaactcctcggtgtcaccctcaacgcgacgatc
gcctaccagcacccgacgatcgcgtcgctcgcgacgcgcatcatcgaaggtgagcccgag
gcacccgccgaggacgactccgccctgtacacggtcggtgccgcggcgggttcgaaggac
gtcgccatcgtcggtctgtccacccgtttgccgggccacgtcgacacccccgaacagatg
tgggagctgctcgcgtccggacgcgacggcatctccgatctgcccgagggccgctggtcg
gagttcgagaacgatcccgccgtgtgggagtcgatccgcaacgccaacaccaggggcggc
tacctcgacgacgtcaagggcttcgacgccgagttcttcgcgatgtcgccgcgcgaggtc
gagatggtcgacccgcaacagcgcctcgcgctggagctgacctgggaagcactcgagcac
gcgcacatcccgccgagcgacctcaagggcggctcggtcggtgtgttcatcggcagctcg
gcgagcgactacatgctcctcgcggtcggcgatccgtccgcagcgcatccctacgcgctc
accggcacctccaccgcggtcatcgcgaaccgcgtgtcgtacttctacgacttccacggc
ccgtcggtcacgctcgacacggcgtgctcgtcgtcgctggtcgccgtgcaccaggccgta
cgtgcgctgcgtaacggcgaagccgacgtcgccctcgccggtggcgtcaacatgctgctc
gccccggccggcaccctcggcttcgacgaactcggcgtcatggcacccgacggccgcatc
aaggcgttctccgccgacgccgacggcatgatccgcgccgagggcgggggtctcgtcgtg
ctcaagcgtctcgaggacgccgagcgcgacggcgacgacatcctcgcggtgatcgccggt
tcggccgtcaaccaggacggccgctccaacggcctggccgctcccaaccccgaagcgcag
gtcgacgtgctgcgccgcgcctaccgcgacgcgcagatcctgccgtccggtgtcgactac
atcgaggcgcacggcaccggcacggtgctcggcgacccgatcgaggccgacgcgctcggc
cgcgtcgtcggtcgtggccgcgaggacgacaagccggtcctgctcggttcggccaagacc
aacttcggtcacctcgagtccgccgcgggtgcggccggtctcatcaaggtcgttctcgcg
atgcagaacgatcagctgcccccgacgctcaactacaccgcgcccaacccgtacatcccg
ttcgacagcgcgcacctgaaggtcatccccgagggcgcgaagtggccgcgctacaccggt
cgcgccgtcgccggtgtatccggcttcggtttcggtggcacgaacgcgcacgtcgtcgtg
cgcgagtacaccggccccgaggggctcgaagcgtccgaggccgaggtcgaggtcctgccg
gaggagatccccgccgcggagaccaccgagcaggcccgcgagctgcccgtcctgctcgcc
gtctccgctgcgatgccgtcgcgtcgccgccgtgccgccgccgatctcgccgactggctc
gagaccgagaagggcagcacgacgccgctcgccgacgtcgcccgcacgctcgctcgtcgc
aatcacggccggtcccgcgcgatcgtcgtggcgagcaaccacggtgaggcgatcgccggt
ctgcgtgccgtcgccgccggcaagcccgcgcagggcgtgttcaccgccgacgctcccgcc
tccaagggcgcggtgtgggtgctctccggcttcggtgcccagcaccgcaaaatggccaag
cagctgtacctggagaacccggtcttcgcggcggccgtcgacgaggtcgacgagctgatc
tatgacgagtcgggctattccatgaaggagaagttcctcgacgacgcgcaggactacgac
gtcgagacggcgcaggtcggcatcttcacgatccagatcggtctcgccgcgctgctgcgc
caccacggtgccgagcccgccgcggtcgtcggccactcgatgggtgaggccgccggcgcc
tacatctcgggcggactctcgctcgaggacgccgtgcgcgtcatctgctcgcgttcgcgt
ctgatgggtgaggccgaatccggcctgaccggcgacgacatccgcctcatggcgctcgtc
gagtacagcgccgccgagatcaccgacgtgctgcccgacttcccgcagctcgaggtctgc
gtctacgcggcgccgacgcacaccgtcatcggtggcccgcaggagcaggtcaacgcgatc
gtcgcgcgtgccgaggccgaggagaagttcgcccgggtcctgcagaccaagggcgcgagc
cacacctcgcaggtcgatccgatcctcggcgagctcgcagccgagctcgccggcatcgaa
ccgcaccgtctgaaggtcgacctgtactcgtcggtcgatcaggagaccctctaccgcgca
ggtcacgagggcatccacgacgtggagtactggaccaagggcatgcgccacagcgtgtac
ttcacgcaggcgatccggcaggcgctgtccgacgggcacaccaccttcgtcgagctcaac
gccaaccccgcgacgctcatgtcggtcgcggcgacggccttcgacgccggtgtgcaggac
ggccagttcatccagacgctcaagcgcaaggaggacgagtccctcggtgtgctgaccgcg
ctcgcgcagttgtacgtgcacgggcagtccgtcgatctgaggacgctgctgccggaaggc
gactacgccgacctgccgcgcaccgccttcctgcgcaagccgtactgggtcgacgccagc
atcggcacctccggcaacggccgcgcgcccggcgcccgggtcgcactgcccgacggccgc
tacgtgtgggaggtgcaggcatccgccgtcaccgatgcggccgagctggtcgtcgcggcg
gcctcgcaggtgctgtccgatgtcacgctcaccgcgtccatcccgcacaccgacgtcccc
gcgaccggcaccctcaccacgacgctcacccggcacccgggtggcgcgtcactgcaggtg
cacgcgaacaccggcgacggtttcacgctcgtccacgagggtgtcgtcacatccggtgag
ccgctgcccgcgcccgtcgcggtggccgcgaagccggccgcgcaggccgaggagcttccc
gaggtcgtcgagtcgttcggcgaccagtgggatcccaacggatcgcagagcctcgacgac
cgcctgacgctgatcgtcgccgagtccatgggttatgcgcccgaggatctgcccgccgag
atcccgctcatcgagctgggcctcgactcgctcatggcggtccgcatcaagaaccgcgtc
gagtacgagttcgacatcccgcagctgcagctgtcggcggtcaaggacgcgagcctgcgc
gacgtcgcgaagtacctgcgatacgccgtcgagaaccgcgaggaggtcgcgcagctcgcc
gagcagcaggccgccgagaaggcagccgaacgcgccgccgctgcggagcaggacgatctt
cccgaggtcgaggacaccaccgcggtgggcgaggccgagcagattctcgccgaagccgaa
gccgaagccgaagccgaagcacagaccgcgcccgagacggccgagcccgagcaggagtcg
agcggtgtcgacgtgccgccgcgcgacgccgcggaacggttgaccttcgcctcgtgggcc
gtggtcacgggcaagtcggccaagggcatcttcaaccggttgccgaagctcgaccgcgat
gtcgccgagaagctcgcggcacggctgaccgagcgggccgagggtgagatcaccgtcgac
gacgtgctctccgccccgaccgtcgagcagctcgccgagaccgtccgtcagcatctcgaa
tccgccgatcgcatcgacggactcgtgcgcaccctgcggccccgcgccgagggatcggac
accgtgccggtcttcgtcttccaccccgcgggtggttcgacggtcgcgtacgagccgctg
ctgcgccgcctgcccgcgcacaccccggtgttcggtttcgagcgcaccgagggcccgatc
gacacccgcgcacaggcgtacctgccgctcatcaaggagatccagggcgacggcccgtac
gtgctgtgcggctggtcgctcggcggtgtcctggcctacgcggtggcccgtctgctccgc
gaggaggacaaggacgtgcgtctcgtcggtctcatcgacaccgtcatggccggtgagaag
gtcgaggacacgcccgacgagatccgcaagcgctggcagcgttactcggcgttcgcgaag
aagacctacggggtcgacgcgccgctgccctacgacctgctggccgaggccggcagcgac
gaggagcagatcggcatcctgatgggtctgctcgagctgagcggggcgcagatccccggc
ggcatcatcgagcaccagcgcacgtcgtggctcgacaaccgcgccatccagaccgcggag
ctgctgccctacgacggcaaggtcgtgctgtacatggccgacaagtatcacgacgacgcg
atcgatctcgagccggccttcgggacccggctgcccgacggtgggtggggcgaggtcgtc
gcggatctcgaggtcgtgcacgtcggcggcgatcacctgcagatcgtcgacgagccgtac
atctcgaaggtgggggaagacctgacccgcaagctggccgacatcgaggcctcgaggagc
tga
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