Rhodococcus pyridinivorans TG9: CEJ39_08935
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Entry
CEJ39_08935 CDS
T05830
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
rby
Rhodococcus pyridinivorans TG9
Pathway
rby03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CEJ39_08935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rby03400
]
CEJ39_08935
Enzymes [BR:
rby01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
CEJ39_08935
DNA repair and recombination proteins [BR:
rby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CEJ39_08935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AWZ24292
LinkDB
All DBs
Position
complement(1880206..1880772)
Genome browser
AA seq
188 aa
AA seq
DB search
MGFTRAELESFRDAVIPDLVAPGCRLLFVGINPGLWTAATGAHFARPGNRFYPALFRAGI
VDRPIDASSGMSDADRDHLLERGVGITNLAPRATARADELTDEELREGGRHLAHVVAEFR
PRAVAVAGITAYRAAFGRRKAKAGRQDDTIGDVPLWVVPNPSGLNAHETVESLARAYAEP
ARAAGILS
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcacgcgagccgaactcgagtccttccgcgatgcggtgatccccgatctcgtc
gcgcccggttgccgcctgttgttcgtcggcatcaatccgggattgtggaccgcggcgacg
ggagcccacttcgcgcggcccggaaatcgcttctaccccgccctgttccgtgccggcatc
gtcgaccggccgatcgacgcgtcgtccggtatgagcgacgccgaccgcgatcacctgctc
gagcggggtgtcggcatcacgaacctggcgccgcgtgcgacggcccgcgccgacgagctc
accgacgaggaactgcgtgagggcggacgccatctggcgcacgtggtggcggagttccgc
cctcgcgccgtggcggtcgcgggcatcaccgcctaccgcgcggccttcggccggcgcaag
gcgaaggccgggcggcaggacgacacgatcggtgacgtcccgttgtgggtggtgcccaat
ccgagcgggttgaacgcccacgagacggtggagtcactggcgcgggcctacgccgaaccg
gcccgggcggccggcatcctgtcctga
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