Rhodococcus pyridinivorans TG9: CEJ39_10885
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Entry
CEJ39_10885 CDS
T05830
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rby
Rhodococcus pyridinivorans TG9
Pathway
rby03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CEJ39_10885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rby03019
]
CEJ39_10885
03009 Ribosome biogenesis [BR:
rby03009
]
CEJ39_10885
Messenger RNA biogenesis [BR:
rby03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CEJ39_10885
Ribosome biogenesis [BR:
rby03009
]
Eukaryotic type
Pre-60S particles
RNases
CEJ39_10885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AWZ26937
LinkDB
All DBs
Position
complement(2316150..2316749)
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AA seq
199 aa
AA seq
DB search
MQDKLVWIDCEMTGLRLGSDKLIEIAALVTDSDLNVLGEGVDIVIHADDDALADMPEVVQ
QMHERSGLTEEVRRSTVSLAEAEKQVLAYIREHVTEAGTAPLAGNSIATDRAFITRDMPE
LDNYLHYRMVDVSSIKELCRRWYPRIYFGQPEKGLSHRALADIKESIRELRYYRRTAFVA
PPGPTPADLAAVVKDLGPA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggacaaactggtatggatcgactgtgagatgacggggctgcgtctcggcagcgac
aaactgatcgagatcgcggctctggtcaccgacagtgatctcaacgtgctcggcgagggc
gtggacatcgtgatccacgccgatgacgacgccctcgccgacatgccggaagtcgtgcag
cagatgcacgagcggtccggcctcaccgaagaggtgcgccgctcgacggtcagcctcgcc
gaagcggagaagcaggtcctcgcgtacatccgggagcacgtcaccgaggcgggcacggcg
ccgctggccggcaactccatcgcgaccgaccgcgcgttcatcacccgcgacatgcccgag
ctcgacaactacctgcactaccgcatggtggacgtcagctcgatcaaggagctgtgccgg
cgctggtatccgcgcatctacttcggccagccggagaagggcctgtcgcaccgggcacta
gcggacatcaaggagtcgatccgcgaactgcgctactaccggcgcacggccttcgtggcg
cctcccggccccactccggccgatcttgcagccgtcgtaaaggacctgggaccggcctga
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