Rhodococcus pyridinivorans TG9: CEJ39_12800
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Entry
CEJ39_12800 CDS
T05830
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
rby
Rhodococcus pyridinivorans TG9
Pathway
rby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CEJ39_12800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rby03400
]
CEJ39_12800
DNA repair and recombination proteins [BR:
rby03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEJ39_12800
RecFOR pathway proteins
CEJ39_12800
BRITE hierarchy
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Ortholog
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Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
RecR_HhH
HHH_3
Transposase_20
DUF2642
Motif
Other DBs
NCBI-ProteinID:
AWZ24940
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Position
2716982..2717578
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AA seq
198 aa
AA seq
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MIASVHGEVLDIALDHVVIEAGGIGYRINTTPATLAGLRRGEQARLATAMIVREDSMTLY
GFVDAEARELFGLLQTVSGVGPRLAMATLAVLEPDALRAALADGNTAALTRVPGIGKRGA
ERMIVELRDKVAAFGATGSSPVAAGASPLRVQIVEALVGLGFTPRQAEPAADKVLAEEPG
ADVSTALRSALKLLGRSR
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgcctcggtacacggcgaggtactcgacatagccctcgaccacgtggtgatcgag
gcgggtgggatcggctatcggatcaacaccacacctgcgaccctcgccggtctccggcgc
ggcgagcaggccagactcgccaccgcgatgatcgtgcgcgaggactccatgacgctgtac
ggcttcgtggacgccgaggcgcgcgaactgttcggcctgctgcagacggtcagcggcgtc
ggcccccggctcgccatggccacgctcgccgtcctcgaacccgatgcgctgcgtgcggct
ctcgccgacggcaacaccgcagcgctgacgcgggtacccgggatcggcaagcgcggtgcc
gaacgcatgatcgtcgaactgcgcgacaaggtcgcggccttcggcgccacgggttcgtcg
cctgtcgcggccggtgcctcgccgctgcgcgtccagatcgtcgaggcgctggtcggcctc
ggattcacgccgcgtcaggccgaaccggccgccgacaaggtccttgccgaggagccgggc
gccgacgtctcgacggcactgcgctcggcgctcaagctgctgggtaggtcgcggtga
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