Rhodococcus pyridinivorans TG9: CEJ39_13410
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Entry
CEJ39_13410 CDS
T05830
Name
(GenBank) Rpf-interacting protein
KO
K21473
peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
Organism
rby
Rhodococcus pyridinivorans TG9
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rby01002
]
CEJ39_13410
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rby01011
]
CEJ39_13410
Peptidases and inhibitors [BR:
rby01002
]
Cysteine peptidases
Family C40
CEJ39_13410
Peptidoglycan biosynthesis and degradation proteins [BR:
rby01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
CEJ39_13410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
Motif
Other DBs
NCBI-ProteinID:
AWZ25050
LinkDB
All DBs
Position
2848706..2850577
Genome browser
AA seq
623 aa
AA seq
DB search
MRRFGIHGGIPRRSGPDGTATTLTAGRRPDGPTPGRTPRTRTGTLLAGLGLVTAVLLTVT
TTASAAPPPPPNPSDAEIDRAGAAVAANIDRVGQLIVRIAGADQQLAELDAQVAIRREDV
NRALVDLQSARDAADLAERVVVDSRRALDDAADRIFAAQKNFDAFVRDSYTRGANSVSLA
AFLDVDGPEDLLDRAQVMRLLSAGRAAVLDALQRARAQEANSHSRARAAKLEADAAAEAA
EQRRAEAEAAIAVARAELGRQAAEKSRIEQERANAQSELDRARVNVAGLEGQRAQYQDWD
RRRAAEEAAAAAAAEEARVAAAAAAERVAADAAARERAAELANGRRPHTLIEESPSTGES
DVASPGEVTTESGAPEGSDTDTSGTDTAAPDYTDDATVPDGTDGGTVPDGTDDGSVPDGT
DSGTIPDEDEDEDSGDDGGIDWENPDPGDPVVETPGSGTGGSGSRPSTPNSTPGIPSRPS
VTGPAAVEIVIDRAMSQIGVPYAWGGGNENGPTRGIRDGGVADVHGDYAKVGFDCSGLMI
YAFAGIGISLPHYTGYQYTAGTQVPSSQMRRGDMIFYGPNASQHVALYLGDGQMLEAPQS
GSFVKISPVRWGGMTPYVVRMVS
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
gtgagacggttcggtatccacggagggattccgcgacggtcggggccggacggcaccgcc
acgacgctcactgcaggccgtcgacccgacggtccgacgcccggtcgcaccccgcggacg
cgcaccggcacgctcctcgccggtttggggttggtcacagccgtgctccttaccgtgacc
acgacggcgtccgccgcaccgcccccgccgccgaacccttcggacgccgagatcgaccgc
gctggtgcggccgtcgcggccaacatcgaccgggtcgggcagctgatcgtccggatcgcc
ggcgcggatcagcagctcgccgagctcgacgcgcaggtcgccatccgccgcgaggacgtc
aaccgcgccctcgtcgatctccagagcgcgcgcgacgcagcggatctcgccgaacgggtc
gtcgtggattcccgccgcgcactcgacgacgccgccgaccggatcttcgctgcccagaag
aacttcgacgcgttcgtccgcgacagctacacccgtggcgccaactcggtctccctcgcg
gccttcctcgacgtcgacggtcccgaagatctgctcgaccgcgcccaggtcatgcggttg
ctatccgccgggcgcgccgcggtgctcgatgcgctccagcgcgcccgggcccaggaggcc
aactcccactcgcgggcacgcgcggccaagctcgaggccgacgcggcggcggaagccgct
gagcagcgcagggccgaggccgaggccgcgattgccgtcgcgcgagcggaactcggtcgg
caggccgcggagaagtcgcgcatcgagcaggaacgtgcgaacgcgcagagcgaactcgac
cgggcccgcgtgaacgttgcgggcctggaagggcaacgcgcgcagtaccaggactgggac
cgtcgccgcgcagccgaggaagcagctgccgcggcggccgccgaggaggcacgggtcgcg
gcagccgcggcagccgagcgtgtcgccgccgacgccgcagcccgggaacgtgcggcggaa
ctcgccaacggccgtcgcccccacacgctgatcgaggagtctccgtcgaccggcgagagc
gacgtcgcctcaccgggtgaggtcaccaccgaatccggagcgccggagggcagtgacacc
gatacgagtggcaccgacacggctgcaccggactacaccgacgacgccacggtcccggac
ggtaccgacggggggaccgtcccagacggtaccgacgatggatccgtcccggatggcacc
gacagcggcacgatccccgacgaggacgaagacgaggacagcggcgacgacggtgggatc
gactgggagaacccggatccgggcgaccccgtcgtggagacccccggatcggggaccggg
ggatcgggttcccgcccctccacaccgaattcgacgcccgggatcccgtcgcgtccgtcc
gtcaccggtcccgctgcggtggagatcgtcatcgaccgtgcgatgtcccagatcggcgtc
ccgtacgcgtggggtggtggcaacgagaacggcccgacccgcggtatccgcgacggcggc
gtcgccgatgtccacggcgactacgccaaggtcggcttcgactgctccggactgatgatc
tacgcgttcgcgggcatcggcatctcgctcccgcactacaccggctaccagtacacggcc
ggtacccaggttccgtcgtcgcagatgagacggggcgacatgatcttctacgggcccaac
gccagccagcacgtcgcgctgtatctcggcgacgggcagatgctcgaggcgccgcagtcg
ggatcgttcgtgaagatctcgccggtacgctggggcggcatgacaccgtacgtggtgcgc
atggtgtcgtga
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