Rhodococcus pyridinivorans TG9: CEJ39_14805
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Entry
CEJ39_14805 CDS
T05830
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rby
Rhodococcus pyridinivorans TG9
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rby03051
]
CEJ39_14805 (pafA)
Enzymes [BR:
rby01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
CEJ39_14805 (pafA)
Proteasome [BR:
rby03051
]
Prokaryotic proteasome
Bacterial regulatory particles
CEJ39_14805 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
AWZ25267
LinkDB
All DBs
Position
3134950..3136308
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AA seq
452 aa
AA seq
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MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATAECDDLLQLVEHDHAGERVLEELLIDAEQRLAEEGIGGDIFLFKNNTDSAGNSY
GCHENYLVARVGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMLKVGSAALVLEMIEAGVPF
RDFALDNPIRAIREVSHDLTGRRPVRLAGGRQASALDIQREYHARAVEYLHQREPDPHVA
QVVDLWGRVLDAVESQDFAKVDTEIDWVIKRKLFQRYQDRYNMELSDPKIAQLDLAYHDI
KRGRGVFDLLQRKGLAARVTDDESVDAAVNTPPQTTRAKLRGDFIAAAQAAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgacgaatcatgggtatcgagacggagttcggcgtcacgtgtaccttccacggg
catcgtcggttgagccccgacgaggtggcccgctatctgttccgccgggtggtgtcctgg
gggcgcagttcgaacgtcttcctgcggaacggggcgcgactgtatctcgatgtcggttcg
caccccgagtacgccaccgccgagtgcgacgacctgctccagctcgtcgagcacgaccat
gccggtgagcgggtcctcgaggaactgctcatcgacgccgagcagcgtctggccgaggaa
ggcatcggcggcgacatcttcctgttcaagaacaacaccgactcggcgggcaactcctac
ggctgccacgagaactatctcgtcgcccgcgtcggcgagttctcccgcatctccgatgtg
ctgctgcccttcctggtgacccgccagctgatctgcggcgccgggaaggtgctgcagacc
cccaaggccgccaccttctgcctgtcgcaacgcgccgagcacatctgggagggcgtctcg
tcggcgaccacccggtcgcggccgatcatcaacacccgcgacgagccgcacgccgacgcc
gagaagtaccggcgcctgcacgtgatcgtcggggactcgaacatgtccgagaccaccacc
atgctcaaggtggggtcggcggcgctggtgctcgagatgatcgaggccggggtgccgttc
cgggacttcgcgctcgacaacccgatccgcgccatccgcgaggtctcccacgacctgacg
ggccggcgcccggtgcgcctggccggcggccggcaggccagcgccctggacatccagcgc
gaataccacgcgcgggcggtggaatatctgcaccagcgcgaacccgacccgcacgtcgcg
caggtggtggacctgtggggccgcgtcctcgacgccgtcgaatcgcaggacttcgcgaag
gtcgacaccgagatcgactgggtgatcaagcgcaagttgttccagcgctaccaggaccgc
tacaacatggagctgtccgacccgaagatcgcccagctcgacctggcctatcacgacatc
aaacgcggacgcggtgtgttcgacctgctgcaacgcaagggactggcggcgcgggtgacc
gacgacgagtccgtcgacgccgcggtgaacaccccgccgcagaccacccgcgcgaagctg
cgcggtgatttcatcgccgccgcgcaggccgcgggccgcgatttcaccgtcgactgggtg
catctgaagctcaacgaccaggcgcagcgcaccgtgttgtgcaaggacccgttccggtcc
gtggacgaacgcgtcgaacggctcatcgcctccatgtga
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