Rhodococcus pyridinivorans TG9: CEJ39_15750
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Entry
CEJ39_15750 CDS
T05830
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rby
Rhodococcus pyridinivorans TG9
Pathway
rby03030
DNA replication
rby03410
Base excision repair
rby03420
Nucleotide excision repair
rby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEJ39_15750
03410 Base excision repair
CEJ39_15750
03420 Nucleotide excision repair
CEJ39_15750
03440 Homologous recombination
CEJ39_15750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rby03032
]
CEJ39_15750
03400 DNA repair and recombination proteins [BR:
rby03400
]
CEJ39_15750
Enzymes [BR:
rby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEJ39_15750
DNA replication proteins [BR:
rby03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CEJ39_15750
DNA repair and recombination proteins [BR:
rby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CEJ39_15750
NER (nucleotide excision repair)
GGR (global genome repair) factors
CEJ39_15750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AWZ25424
LinkDB
All DBs
Position
complement(3354756..3357479)
Genome browser
AA seq
907 aa
AA seq
DB search
MTRASTSATSTAATDDRPTLLLLDGHSLAFRAFYALPAENFKTHSGQTTNAVYGFTSMLI
NLLRDEQPTHVAAAFDVSRKTFRAELFAAYKAQRSAAPDDFKGQIDLTKDVLGAMGIPVM
AIEGYEADDIIATLATQAHAQGFRVLVVTGDRDALQLVNGDITVLYPRRGVSDLTRFTPD
AVEEKYGLTPQQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIREYGSLSGLVDRVDEVRG
KTGDALRENLSNVLLNRQLTEMVRDVAVPYTPEQLALAPWDRDRIHRLFDDLEFKVLRDR
LFETLSSAEPEAEEGFEVRGGIVEPGALGDWLAEHAPAGRRHGLAVVGTGTPYGGDATAI
AVAGADGEGAYVSTVALTPEDENALAAWLANPAVEKAVHEAKFAIHALRGRGWTLAGITS
DTALAAYLVRPGQRSFKLDDLSLRYLKRELRVEDTGAQQLSLLDDEDAADAQAAEAQILA
ARAVVDLAAALDTELGEIESVRLLTEMELPLLEVLAELEATGIAVDSAHLHDLQSEFAAQ
VAAAANAAYEVIGKQINLGSPKQLQVVLFDELEMPKTKKTKTGYTTDADALQNLFDKTGH
PFLEHLLAHREHTKMKTTVDGLIKSIADDGRIHTTFNQTVAATGRLSSTEPNLQNIPVRT
EAGRRIRDGFVVGDGFDVLLTADYSQIEMRIMAHLSADEGLIEAFRTGEDLHTFVASRAF
GLPLEEVTPELRRRVKAMSYGLAYGLSAYGLAQQLKISTDEAREQMEAYFTRFGGVRDYL
YNVVEEARKVGYTSTLYGRRRYLPDLNSDNRQRREIAERAALNAPIQGTAADIIKVAMID
VQKALSEAGLRSRMLLQVHDELVLEVVEAEREQVEALVRDKMDSVIELSVPLEVSVGYGR
SWDAAAH
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgtgcatccacttccgcgacgtccaccgcggccaccgacgaccgcccgaccctg
ctgctcctcgacggccattccctcgcgttccgcgcgttctacgcgctgcccgccgagaac
ttcaagacccacagcgggcagaccacgaacgcggtctacgggttcacctccatgctcatc
aacctgctgcgcgacgagcagcccacgcacgtcgcggcggcattcgacgtcagccgcaag
accttccgtgccgaactgttcgccgcctacaaggcccagcgcagcgccgcacccgacgac
ttcaaggggcagatcgacctcaccaaggacgtcctcggcgcgatggggatcccggtgatg
gcgatcgagggctacgaggccgacgacatcatcgccacgctcgcgacgcaggcgcacgcc
cagggcttccgggtgctcgtggtgaccggcgaccgcgacgcgctccaactcgtcaacggc
gacatcacggtgctgtatccgcggcgcggcgtctccgacctgacgcgcttcacccccgac
gcggtggaggagaagtacggactcaccccccagcagtatccggacttcgcggcgctgcgc
ggcgacccgagcgacaacctgcccggcatccccggcgtgggcgagaagaccgccgcgaaa
tggatccgcgagtacggaagcctgagcggactcgtcgaccgcgtcgacgaggtgcgcggc
aagaccggcgacgcgctgcgcgagaacctgtccaacgtgttgctcaaccgccagctcacc
gagatggtgcgcgacgtggccgtgccgtacacccccgaacaactcgccctcgccccgtgg
gaccgcgaccgcatccaccgcctgttcgacgacctcgagttcaaggtgctgcgcgaccgg
ctgttcgagacgctctcgtcggccgagcccgaggccgaggagggcttcgaggtgcgcggc
gggatcgtcgagccgggtgccctcggcgactggctcgccgagcacgccccggcgggtcga
cgtcatggcctcgccgtggtgggcaccggcactccctacggaggcgacgcgaccgcgatc
gccgtcgccggggccgacggtgaaggcgcctatgtgagcacggtggcgctcacgcccgag
gacgagaacgccctcgccgcatggctcgcgaaccccgcagtggagaaggccgtgcacgag
gcgaagttcgccatccacgcgctgcgcggacgcggctggacgctcgccggcatcaccagc
gacaccgcgctcgccgcctatctggtgcggcccggccagcgctcgttcaagctcgacgac
ctgtcgctgcgctacctcaagcgtgagctgcgagtggaagacaccggcgcgcaacaactc
tcgttgctcgacgacgaggacgccgccgacgcgcaggcggccgaggcgcagatcctcgcg
gcgcgcgccgtcgtcgacctcgccgcggccctcgacaccgaactcggcgagatcgaatcg
gtgcgcctgctcaccgagatggaactgcccctgctcgaggtcctcgcagaactcgaggcc
accggcatcgccgtcgactcggcgcacctgcacgacctgcagtccgaattcgcggcccag
gtcgccgccgccgcgaacgccgcctacgaggtgatcggcaagcagatcaacctcggctcg
ccgaaacagttgcaggtggtgctgttcgacgagctcgagatgccgaagacgaagaagacc
aagaccggctacaccaccgacgcggatgccttgcagaacctgttcgacaagacgggccat
cccttcctcgaacacctgctcgcgcaccgtgagcacaccaagatgaagaccaccgtcgac
ggactcatcaagtccatcgccgacgacggtcgcatccacaccaccttcaaccagaccgtc
gcggcgacgggccggctctcgtcgaccgagccgaacctgcagaacattccggtgcggacc
gaggccggtcgccggatccgcgacggtttcgtggtgggcgacggattcgacgtgctgctc
accgccgactacagccagatcgagatgcgcatcatggcgcacctgtcggccgacgagggg
ctcatcgaggcattccgtacgggcgaggacctgcacaccttcgtggcgtcgcgggcgttc
gggctgccgctcgaggaggtcaccccggagctgcgtcgccgcgtcaaggcgatgtcctac
ggtctcgcctacgggttgagcgcctacggtctcgcccagcagctgaagatctccaccgac
gaggcccgcgagcagatggaggcctacttcacccgcttcggcggcgtgcgcgactacctc
tacaacgtggtcgaggaggcccgcaaggtcggctacacgtccaccctctacggccgccgc
cggtacctgcccgacctcaacagcgacaaccggcagcgccgggagatcgccgagcgcgcc
gcgctcaacgcccccatccagggcacggccgccgacatcatcaaggtcgcgatgatcgac
gtgcagaaggcgctcagcgaggccggactgcggtcgcggatgctgctgcaggtgcatgac
gaactcgtgctcgaagtggtcgaggccgagcgcgaacaggtcgaggcgctcgtgcgcgac
aagatggactccgtcatcgaattgtcggtgccgctcgaggtctcggtcggttacggccgc
agctgggacgccgcggcgcactga
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integrated database retrieval system
