Rhodococcus pyridinivorans TG9: CEJ39_16205
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Entry
CEJ39_16205 CDS
T05830
Name
(GenBank) fumarate reductase/succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rby
Rhodococcus pyridinivorans TG9
Pathway
rby00020
Citrate cycle (TCA cycle)
rby00190
Oxidative phosphorylation
rby00650
Butanoate metabolism
rby00720
Other carbon fixation pathways
rby01100
Metabolic pathways
rby01110
Biosynthesis of secondary metabolites
rby01120
Microbial metabolism in diverse environments
rby01200
Carbon metabolism
Module
rby_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rby_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rby_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CEJ39_16205
00650 Butanoate metabolism
CEJ39_16205
09102 Energy metabolism
00190 Oxidative phosphorylation
CEJ39_16205
00720 Other carbon fixation pathways
CEJ39_16205
Enzymes [BR:
rby01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CEJ39_16205
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
HI0933_like
Thi4
GIDA
Motif
Other DBs
NCBI-ProteinID:
AWZ25502
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Position
complement(3449888..3451804)
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AA seq
638 aa
AA seq
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MVDVERHKVDVVVIGAGGAGLRAVIEARQRAFSVAVVCKSLFGKAHTVMAEGGCAAAMGN
ANPRDSWQVHFQDTMRGGKFLNNWRMAELHAREAPDRVWELETYGALFDRTPDGRISQRN
FGGHTYPRLAHVGDRTGLELIRTMQQKIVSLQQEDHAEHGDYEARVRVFAECTITELLKD
DEGRIAGAFGYWRETGRFVLFEAPAVVIATCGIGKSWKVTSNSWEYTGDGHALALRAGAT
LINMEFVQFHPTGMIWPPSVKGILVTEGVRGDGGVLKNSEGERFMFSYIPPVFKGQYAET
EEEADRWYEDQENNRRTPDLLPRDEVARAINSEVKDGRGTPHGGVFLDIASRMPADEIMR
RLPSMHHQFKELADVDITAEAMEVGPTCHYVMGGIEVDPDTAAAAVPGLFAAGECSGGMH
GSNRLGGNSLSDLLVFGRRAGLGAADYVQSLTSRPIVGDADIDAAARAALSPFDPADTDR
AENPYTLHTDLQQVMQDLVGIIRRADEIERALRELDTLRTRIRNVAVEGHRQFNPGWHLA
LDLRNMLLVCECVARAALQRTESRGGHTRDDHPSMDSEWRRTLLACRLDGGDPFVPDVTV
TAERQQPMRPDLLELFDIDELGKYYTDEELADHPGGRG
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgtcgaacggcacaaggtcgacgtcgtcgtgatcggagcaggcggcgccggg
ctacgcgcggtgatcgaggcgcggcaacgcgccttctccgtcgccgtggtgtgcaagtcg
ctgttcggcaaggcccacaccgtgatggccgagggcggatgtgccgccgcgatgggcaat
gccaacccccgcgactcctggcaggtgcacttccaggacacgatgcgcggcggcaagttc
ctcaacaactggcggatggccgaactgcacgcccgcgaggcccccgaccgcgtgtgggag
ctggagacctacggagcgctgttcgaccgcacccccgacggacggatcagccagcgcaac
ttcggcggccacacctatccgcgactcgcccacgtcggcgaccgcaccggactcgaactc
atccgcacgatgcagcagaagatcgtgtcgctgcagcaggaggaccacgccgagcacggc
gactacgaggcccgggtgcgggtcttcgccgaatgcaccatcaccgaactgctgaaggac
gacgagggacgcatcgccggtgcgttcggatactggcgcgagaccgggcgtttcgtgttg
ttcgaggcgcccgcggtcgtcatcgccacctgtggtatcggcaagtcgtggaaggtcacg
tcgaactcgtgggagtacacgggcgacggtcacgccctcgccctgcgtgccggcgccacc
ctgatcaacatggagttcgtccagttccacccgacagggatgatctggccgccgagcgtg
aagggcatcctcgtcaccgagggtgtgcgaggcgacggcggagtgctgaagaactccgag
ggggagcggttcatgttctcctatatcccgccggtgttcaaaggccagtacgcggagacc
gaggaggaggccgaccgctggtacgaggaccaggagaacaatcgccgcacgcccgacctg
ctcccgcgcgacgaggtcgcccgcgccatcaactccgaggtcaaggacggccgggggact
ccgcacggcggagtcttcctcgacatcgcctcgcggatgccggccgacgagatcatgcgc
cgcctgccgtcgatgcatcaccagttcaaggaactcgccgacgtcgacatcaccgccgag
gccatggaggtcggcccgacctgccactacgtgatgggcggcatcgaggtcgaccccgac
accgccgctgcggcagtcccggggctgttcgccgccggggaatgttccggtggcatgcac
ggatcgaaccggctgggcgggaattcgctgtccgatctgctggtcttcggtcgccgggca
ggtctcggcgccgcagactacgtgcagagcctcacctcgcggccgatcgtcggcgacgcc
gacatcgacgccgccgcccgtgcggcgctctcgcccttcgatccggccgacaccgatcgc
gccgagaacccgtacaccctgcacaccgacctgcagcaggtcatgcaggatctcgtgggc
atcatccggcgcgcggacgagatcgaacgtgccctgcgcgaactcgacaccctgcgcaca
cggatccgcaacgtcgcggtggagggccaccgccagttcaacccgggctggcatctcgcc
ctggacctgcggaacatgctcctcgtatgcgagtgcgtcgcgcgggccgcgttgcagcgc
accgagagccgcgggggacatacccgcgacgaccacccgtcgatggactccgaatggcgt
cgcactctgctcgcctgtcgcctggacggcggcgacccgttcgtccccgacgtgacggtc
accgccgaacggcagcaaccgatgcgtcccgacctgctggagctgttcgacatcgacgaa
ctcgggaagtactacaccgacgaggaactcgcggatcatcccggagggaggggttga
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