Rhodococcus pyridinivorans TG9: CEJ39_16580
Help
Entry
CEJ39_16580 CDS
T05830
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rby
Rhodococcus pyridinivorans TG9
Pathway
rby03030
DNA replication
rby03430
Mismatch repair
rby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEJ39_16580
03430 Mismatch repair
CEJ39_16580
03440 Homologous recombination
CEJ39_16580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rby03032
]
CEJ39_16580
03400 DNA repair and recombination proteins [BR:
rby03400
]
CEJ39_16580
Enzymes [BR:
rby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEJ39_16580
DNA replication proteins [BR:
rby03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CEJ39_16580
DNA repair and recombination proteins [BR:
rby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CEJ39_16580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
UVR
Motif
Other DBs
NCBI-ProteinID:
AWZ25570
LinkDB
All DBs
Position
3533413..3535161
Genome browser
AA seq
582 aa
AA seq
DB search
MTSPQPSALGVQLGFDELDTPLRETTFVVVDLETTGGKAAEDAITEIGAVKIRGGEVLGE
FATLVDPGRPIPPYIVQLTGITTAMVYAAPKVEEVLPAFLEFASGAVLVAHNAGFDVGFL
EAATAQCELAWPRFQVLCTVKLARRVLGRDEAPSVKLSALAELFRVSTVPTHRALDDARA
TVDVLHALIERVGNQGVHSLTELRDYMPVVTAEQRAKRALAAHLPRKPGVYMFRGPSDEV
LYVGTAVDLHRRVRTYFTGSETRPRLREMVALTTRIDHVQCAHGLEAGVRELRLIAAHTP
PYNRRSKYPMRGWWIILTDEAFPRLAVSRTPGPDSVGPFSVRADAADVAALLAEMCGLRT
CTRRIGRTARHGDRCPPVAVGGCAAAAFGVQDASAYAAQVERARAVVRGTADDAVESAQQ
RLDALVRDQLFENAARLRDRLAAALVALRRTQRLAALAAVDELVAARPRAEGGWEFAVVR
AGRLASAGVAPRGVRPMPVVEAIVAAAETVRPSPGPLRGASPEEIGLVARWLDGEGIRIV
RASEGWCEPTRGAGRWSTWAELARDARAVRRLLSADDPHRLG
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgccgcaaccatccgccctcggcgtgcaactcggtttcgacgagctcgacact
ccgctgcgcgagaccaccttcgtcgtcgtcgacctcgagacgaccggcgggaaggcagcc
gaggacgccatcacagagatcggcgcggtgaagatccgcgggggcgaggtgctcggcgag
ttcgcgaccctcgtcgatccggggcgacccatccccccgtacatcgtgcagctcaccggc
atcaccaccgcgatggtctatgcggcgcccaaggtcgaggaggtgctgcccgccttcctg
gaattcgcgtccggagcggtgctcgtcgcacacaacgccggattcgacgtcggcttcctc
gaggcggccacggcgcagtgcgaactcgcgtggccccgcttccaggtgctgtgcaccgtc
aagctggcccgccgcgtcctcggacgcgacgaagcgccgtcggtgaagctgtccgcgctg
gccgaactgttccgggtctccaccgtgcccacccaccgcgccctggacgacgcacgcgcc
accgtggacgtcctgcacgccctcatcgaacgggtcggcaaccagggcgtccacagcctc
accgaactgcgcgactatatgccggtggtcaccgccgagcagagggccaaacgcgcactc
gccgcgcatctgccgcgcaaaccgggtgtctacatgttccgcggcccgtcggacgaggtg
ctgtacgtcggcacggcggtcgacctgcaccggcgtgtccgtacctatttcacgggctcc
gagacgcgaccgcggttgcgcgagatggtcgcgctcaccacacgcatcgatcacgtccaa
tgcgcccacgggctcgaggccggcgtccgcgaactccggttgatcgcggcccacacccct
ccctacaaccgccggtcgaaatatccgatgcgcggttggtggatcatcctcaccgacgag
gcgttcccgcgcctcgccgtgagccgcacccccggacccgactcggtcggcccgttctcg
gtgcgcgccgacgccgcggatgtcgcggcactgctcgcggagatgtgcggtctgcgcacc
tgcacgcgcaggatcggccgtacggcccgccacggcgaccgctgcccgcccgtcgcggtc
gggggctgcgccgcagccgccttcggggtccaggacgcctccgcctacgcagcccaggtc
gagcgtgcgcgcgcggtcgtccgcggaaccgccgacgacgccgtcgaatcggcgcagcag
cgactcgacgccctcgtgcgcgaccagctgttcgagaacgccgcccgcctccgcgaccgc
ctcgccgccgccctcgtcgcgctgcggcgcacgcaacgcctcgcggcgctggcggccgtc
gacgaactcgtcgccgcgcgtccgcgggccgagggcgggtgggagttcgccgtcgtgcgc
gccggtcgtctcgcgtccgccggagtggcaccgcgcggtgtgcgcccgatgcccgtcgtc
gaggcgatcgtcgccgcggccgagacggtgcggccgtcacccggcccgctccggggcgcg
tccccggaggagatcggtctggtcgcacgttggctcgacggcgagggcatccgcatcgtc
cgggcgagcgagggctggtgcgaaccgacacggggtgcgggccggtggagcacgtgggcc
gagctcgcccgcgacgcccgcgcggtccgcaggctcctctccgccgacgacccgcaccgc
ttaggctga
DBGET
integrated database retrieval system
