Rhodococcus pyridinivorans TG9: CEJ39_18930
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Entry
CEJ39_18930 CDS
T05830
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rby
Rhodococcus pyridinivorans TG9
Pathway
rby00020
Citrate cycle (TCA cycle)
rby00190
Oxidative phosphorylation
rby00650
Butanoate metabolism
rby00720
Other carbon fixation pathways
rby01100
Metabolic pathways
rby01110
Biosynthesis of secondary metabolites
rby01120
Microbial metabolism in diverse environments
rby01200
Carbon metabolism
Module
rby_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rby_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rby_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CEJ39_18930
00650 Butanoate metabolism
CEJ39_18930
09102 Energy metabolism
00190 Oxidative phosphorylation
CEJ39_18930
00720 Other carbon fixation pathways
CEJ39_18930
Enzymes [BR:
rby01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CEJ39_18930
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
Thi4
DAO
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
AWZ25961
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Position
4013664..4015415
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AA seq
583 aa
AA seq
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MQEHRYDVVIVGAGGAGMRAAIEAGPRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVEFFNEFYALDITLTETENGPVATGV
IAYELATGEIHVFHAKAIVFATGGSGRMYKTTSNAHTLTGDGLGIIFRKGLPLEDMEFHQ
FHPTGLAGLGILISEAVRGEGGILRNADGERFMERYAPTIKDLAPRDIVARSMVLEVLEG
RGAGPNKDYVYIDVTHLGEDVLEEKLPDITEFSRTYLGVDPVTELVPVFPTCHYVMGGIP
TNVDGEVLRDNENVVPGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIAAAEYANS
TKHVEMPEQPTKYVDGWLDLILHQGGKERVADIRTELQQTMDNNASVFRTEETLTQALND
IHELKKRYKEITVHDKGKRYNSDLLEALELGFLLEMAEVTVVGALNRKESRGGHAREDYP
KRDDENFLKHTMAYKVGEELISDIRLDYKPVVQTRYEPMERKY
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacatcgttacgacgtagtcatcgtcggcgccggcggcgccggcatgcgtgcg
gccatcgaagccggcccgcgtgcgcgcaccgcagtgctcacgaagctctaccccacccgc
agccacaccggcgccgctcagggtggcatgtgcgccgccctcgcgaacgtcgaagaggac
aactgggagtggcacaccttcgacaccgtcaagggtggcgactacctggtcgaccaggac
gctgcggagatcatggccaaggaggccatcgacgccgttctcgacctcgagaagatgggt
cttccgttcaaccggacgcccgagggcaagatcgaccagcgtcgcttcggtggtcacacc
cgcgaccacggtaaggccccggtccgtcgcgcgtgctacgccgccgaccgcaccggccac
atgattctgcagacgctgtaccagaactgcgtcaagcacgacgtcgagttcttcaacgag
ttctacgcactcgacatcaccctcaccgagaccgagaacggtcccgtcgcgacgggtgtc
atcgcgtacgagctcgcgaccggcgagatccacgtcttccacgccaaggccatcgtcttc
gcgacgggcggctcgggccgtatgtacaagacgacgtcgaacgcccacaccctcacaggt
gacggcctcggcatcatcttccgcaagggcctgccgctcgaggacatggagttccaccag
ttccatccgacgggcctggccggtctcggcatcctcatctcggaggccgtgcgtggcgag
ggcggcatcctccgcaatgccgacggcgagcggttcatggagcgctacgcccccaccatc
aaggacctcgcgccccgcgacatcgtcgcccgctcgatggtgctcgaggtgctcgagggt
cgcggcgccggaccgaacaaggattacgtctacatcgacgtgacccacctcggcgaggac
gtcctcgaggagaagctccccgacatcaccgagttctcccgcacctacctcggtgtcgac
cccgtcaccgagctcgtgcccgtgttcccgacctgccactacgtcatgggcggtatcccg
accaacgtcgacggcgaggtcctccgcgacaacgagaacgtcgtgcccggcctgtacgcg
gccggcgagtgcgcgtgcgtgtccgtccacggcgccaaccgtctcggcaccaactcgctg
ctcgacatcaacgtcttcggtcgtcgcgccggcatcgccgccgcggagtacgccaacagc
acgaagcacgtcgagatgcccgagcagccgacgaagtacgtcgacggctggctcgatctg
atcctgcaccagggcggcaaggagcgggtggccgacatccgcaccgagctgcagcagacg
atggacaacaacgcgtcggtgttccgcaccgaggagacgttgacgcaggcgctcaacgac
atccacgagctgaagaagcgctacaaggagatcacggtccacgacaagggcaagcgctac
aacagcgacctgctcgaggcgctggagctcggcttcctcctcgagatggccgaggtcacc
gtcgtcggcgcgctgaaccgcaaggaatcgcgtggcggacacgcccgcgaggactacccg
aagcgcgacgacgagaacttcctcaagcacaccatggcgtacaaggtgggcgaggaactg
atctccgacattcgcctggactacaagccggtggtccagacccggtacgagcccatggag
cgtaagtactga
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