Rhodococcus pyridinivorans TG9: CEJ39_19340
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Entry
CEJ39_19340 CDS
T05830
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rby
Rhodococcus pyridinivorans TG9
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rby03016
]
CEJ39_19340
Enzymes [BR:
rby01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CEJ39_19340
Transfer RNA biogenesis [BR:
rby03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CEJ39_19340
Prokaryotic type
CEJ39_19340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AWZ26030
LinkDB
All DBs
Position
complement(4102388..4103284)
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AA seq
298 aa
AA seq
DB search
MVSASAEAHEPADPSEGGGLVASHETTRLRLDIAYDGTDFSGWARQPGRRTVCGEIEEKL
SAIVRTPVLLTVAGRTDAGVHASGQVAHVDVPSAVLPDDPSRWVRRLARFLPRDVRVTGI
SVAPEHFDARFSAIRRHYEYRLTTAVYGAEPLRARDTVAWPKAVDLDAMQRASQSLLGLH
DFAAFCKRREGATTVRELQRYDWTREGDILTAYVSADAFCWSMVRSLVGAALAVGEGRRS
VEWMTALLDERERAASVAVAPAHGLSLVRVDYPADEELAARNAATRETRGPITPGCCG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
ttggtttcggcatctgctgaagctcacgagcccgccgacccttccgagggcggcgggctc
gtggcttctcacgagacaacccgtctgcgactcgacatcgcgtacgacggcacagacttc
tccggctgggcacggcagcccggacgtcgcacggtgtgcggggagatcgaggaaaagctc
tccgcgatcgtccgcacccccgtgctgctcaccgtcgccggtcgcaccgacgccggcgtg
cacgcttccgggcaggtcgcccacgtcgacgtcccctccgcggtgctgcccgacgatccg
tcgcgctgggtccgccgtctcgcacggttcctgccccgcgacgtgcgggtcaccgggatc
tccgtcgcccccgaacatttcgacgcgcgtttctcggcgatccggcgccactacgaatac
cgcctcaccacagcggtgtacggcgccgagccgctgcgtgcccgcgacaccgtcgcgtgg
ccgaaggccgtcgatctcgatgcgatgcaacgcgcgtcgcagtcgctgctcggcctgcac
gacttcgccgccttctgcaagcggcgggagggtgcgacgaccgtacgtgaactgcagcga
tacgactggacccgcgaaggtgacatcctcaccgcctatgtcagcgccgacgccttctgc
tggtcgatggtgcgcagcctcgtcggcgcggccctggccgtgggggaggggcgtcgcagc
gtcgagtggatgacggccctgctcgacgaacgcgaacgtgcggcgtccgtcgcggtggca
ccggcccacggcctgtcactggttcgcgtcgactaccctgctgacgaggaactcgccgcg
cgcaacgctgcgacgcgggagacgcgcgggcccatcacgcccggctgttgcggatga
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