Rhodococcus pyridinivorans TG9: CEJ39_19350
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Entry
CEJ39_19350 CDS
T05830
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rby
Rhodococcus pyridinivorans TG9
Pathway
rby03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CEJ39_19350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rby03021
]
CEJ39_19350
03400 DNA repair and recombination proteins [BR:
rby03400
]
CEJ39_19350
Enzymes [BR:
rby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CEJ39_19350
Transcription machinery [BR:
rby03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CEJ39_19350
DNA repair and recombination proteins [BR:
rby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CEJ39_19350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AWZ26032
LinkDB
All DBs
Position
complement(4103875..4104936)
Genome browser
AA seq
353 aa
AA seq
DB search
MLISQRPALTEEVIAENRSKFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDIILNLKGLVVSSEEDEPVTMYVRKQGPGTVTAGDIVPPAGVTIHN
PDLHIATLNDKGKLEIELVVERGRGYVPAVQNKASGAEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDRLILDVETKNSISARDALASAGKTLVELFGLARELNVEAEGIEIGPSPAE
ADHIASFGLPIEDLDLTVRSYNCLKREGVHTVGELVARTESDLLDIRNFGQKSIDEVKVK
LHSLGLSLKDSPASFDPSTVAGYDAATGTWSDTEAGSFGDNDGNEDYAETEQL
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgctcatctctcagcgacccgcactgaccgaagaggtcatcgctgaaaaccgctcgaag
ttcgtcatcgagccgctcgagcctggcttcgggtacaccctcggcaactcgcttcgtcgc
accctgctctcgtcgatcccgggcgccgctgtcaccagcatccgcatcgacggcgttctc
cacgagttcaccaccgttcccggggtgaaggaggatgtcaccgacatcatcctgaacctc
aagggtctcgtggtgagctccgaagaggacgagccggtcaccatgtatgtccgcaagcag
gggccgggcacggtcacggccggcgacatcgtgcccccggccggtgtcaccatccacaac
ccggatctgcacatcgccaccctgaacgacaagggcaagctggagatcgagctcgtcgtc
gagcgcggtcgcggctacgttcctgccgtgcagaacaaggcgtccggcgccgagatcggc
cgtatcccggtcgactcgatctactcgccggtgctcaaggtgacgtacaaggtggaagcg
acccgcgtcgagcagcgcaccgacttcgatcggctcattctcgacgtggagaccaagaac
tcgatcagcgcgcgggacgcgctcgcctcggcgggcaagaccctcgtggagctcttcggt
ctggctcgtgagctgaacgtcgaagcagaaggcatcgagatcggtccctcgcccgccgag
gccgaccacatcgcctccttcggacttccgatcgaggacctcgacctcacggtccggtcc
tacaactgcctcaagcgcgaaggtgtccacaccgtcggcgagctcgtggcacggacggaa
tccgacctgctcgacatccgcaacttcggccagaagtccatcgacgaggtcaaggtcaag
ctgcactcgctcggcctgtccctcaaggacagcccggcatcgttcgaccccagcaccgtc
gccggctacgacgccgcgaccggtacctggagcgataccgaggccggctccttcggtgac
aacgacggcaacgaggactacgccgagaccgagcagctgtag
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