Rhodococcus pyridinivorans TG9: CEJ39_23035
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Entry
CEJ39_23035 CDS
T05830
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rby
Rhodococcus pyridinivorans TG9
Pathway
rby03030
DNA replication
rby03430
Mismatch repair
rby03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rby00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEJ39_23035
03430 Mismatch repair
CEJ39_23035
03440 Homologous recombination
CEJ39_23035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rby03032
]
CEJ39_23035
03400 DNA repair and recombination proteins [BR:
rby03400
]
CEJ39_23035
Enzymes [BR:
rby01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEJ39_23035
DNA replication proteins [BR:
rby03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CEJ39_23035
DNA repair and recombination proteins [BR:
rby03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CEJ39_23035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AWZ26675
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All DBs
Position
4946237..4947016
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AA seq
259 aa
AA seq
DB search
MTHWPDRPICAFDLETTDRDPRNARIVTACVATFDGDRIGTRSWLLDPGIAIPEETTAIH
GITTAHARAEGLDYLEGYKQIRQAVSGAWARGHIVVAFNASYDLTVLDAEGRRLGLTGLD
IGTVVDPYVIDREMDRSRPGRRTLQAVCEAYGVSLPNPHEAEADALAAGHLTRALVARFP
ELAELDIMADQAAWHAERQRSFAEYLRGLGREVVDVDDSWPVRLPTPVGTDVLERPATET
KFRRALRAIREFFRRLRRR
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgacgcactggccggacagaccgatctgcgcgttcgatctcgagaccaccgaccgggat
ccccgcaacgcccgcatcgtcacggcatgcgtcgcgaccttcgacggcgatcgcatcggc
acacgctcgtggctgctcgacccgggtatcgcgatacccgaggagaccaccgcgatccac
ggcatcaccaccgcccacgcccgcgccgaaggactcgactatctcgagggatacaagcag
atccggcaggccgtgagcggcgcgtgggcgcgcggccacatcgtcgtcgcattcaacgcc
agctacgacctgacggtcctcgacgccgaaggacgccggctcggcctgacggggctcgac
atcggcacggtcgtcgacccgtacgtcatcgaccgggagatggaccgcagccggcccggc
aggcgcacactgcaggcggtgtgcgaggcgtacggggtgtcgctgccgaatccgcacgag
gccgaggccgacgcgctcgccgccggccacctgacccgcgcgctcgtggcgagattcccc
gagctcgccgaactcgacatcatggccgatcaggccgcctggcacgccgaacggcaacgc
agctttgccgagtacctgcgcgggctgggtcgcgaggtcgtcgacgtcgacgacagctgg
cccgtccggctccccacgccggtgggtaccgatgtcctcgagcgtcccgcgaccgagacg
aagttccggcgcgcgctgcgcgcgatccgcgagttcttccggcgactgcgccgccgctga
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