Aestuarium zhoushanense: B9057_06470
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Entry
B9057_06470 CDS
T05514
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rbz
Aestuarium zhoushanense
Brite
KEGG Orthology (KO) [BR:
rbz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rbz03016
]
B9057_06470
Enzymes [BR:
rbz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B9057_06470
Transfer RNA biogenesis [BR:
rbz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B9057_06470
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AUJ63976
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All DBs
Position
1296066..1297223
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AA seq
385 aa
AA seq
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MKTITTTEALAAFCAEAAKRPYVTVDTEFLRERTYYSKLCLLQMAYQDDAGSDAVLVDPL
VEGLSLEPVYDLFRNTDVVKVFHAARQDLEIFFVEGGVIPEPLFDTQVAAMVCGYGEQVG
YETLVRKIANASLDKSSRFTDWSRRPLTDAQLTYALADVTHLRDIYEVLSKRLAKSGRER
WVSEEMAVLKDPDTYRTHPEDAWMRVKTRTNSGKFLSIVKELARFREEFAQTRNIPRSRV
YKDDALVELASTKPENEKDLARSRLLLREARKGEIADGILAAVKAGIATPPEKAPKPDLT
REKLQVNPAIADLLRVLLKAKAEEEGVAQKLIATSADLDAIAAGERDVPALSGWRREVFG
EEALLLCQGKVALATKGTNVVTIRL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgatcaccacgaccgaggcgctggccgccttttgcgcagaagccgccaaacgt
ccctatgtgactgtcgatacagagtttttgcgtgaacgcacgtattactccaaactttgc
cttcttcagatggcgtatcaggacgacgctgggtcggatgctgtgctggttgatccgctg
gtggaaggcttgtcgctcgaacccgtctatgaccttttccgtaatacggatgtggtgaag
gtgttccacgcggcgcgtcaggacctcgagattttctttgtcgaaggcggcgtgatccct
gagccgctgtttgatacccaagttgctgcgatggtttgcggctacggcgaacaggtcggg
tatgagacattggtgcgcaagatcgccaatgcatcgctcgataaatcgtcacgtttcacc
gattggtcgcggcgtccgctgaccgatgcgcagttgacctatgcgctggccgacgtgacg
cacttgcgcgacatttacgaggttctgtccaaacgccttgccaaatcgggacgtgaacgt
tgggtgtccgaggaaatggctgtcctcaaggacccagacacctatcgcacccatcccgaa
gatgcgtggatgcgcgtcaaaacccgcaccaattcgggcaagttcctgtcgatcgtcaaa
gagttggcgcgcttccgcgaggaattcgcccagacccgcaacatcccgcgcagtcgtgtg
tataaagatgatgcgttggtggaattggcctcgaccaaacccgagaacgaaaaagacctc
gcgcggtctcgattgttgctgcgcgaagctcgcaagggcgagattgccgatggtatcttg
gccgctgtgaaagctggtattgcgaccccgcccgaaaaggcgccaaagcctgatctgacc
cgtgaaaagctacaggtgaatcctgcgatcgcggaccttctacgcgtgctgttgaaagct
aaagccgaagaagaaggcgttgcgcaaaaactgatcgcgacctctgcagacctcgatgcg
attgcagcgggcgaacgtgatgtgcctgccttgtccggctggcgtcgtgaggtctttggc
gaagaggcgctgctcttgtgtcagggtaaggttgcgctggcgaccaagggcaccaatgtg
gtgacgatccgcctttaa
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