Aestuarium zhoushanense: B9057_11780
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Entry
B9057_11780 CDS
T05514
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
rbz
Aestuarium zhoushanense
Pathway
rbz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rbz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B9057_11780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbz03400
]
B9057_11780
DNA repair and recombination proteins [BR:
rbz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B9057_11780
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_2
HHH_5
UVR
HHH
GIY_YIG_domain
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
AUJ64941
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Position
complement(2368262..2370124)
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AA seq
620 aa
AA seq
DB search
MNDNSDAPLTGYDRIAAYLKTLDGSPGVYRMLDEESRVLYVGKARNLRNRVSNYARPGNH
SGRIARMISETASMMFLTTRTETEALLLEQNLIKQLKPRYNVLLRDDKSFPSVLVTDHAF
PMVKKHRGAKKEKGQYFGPFASAGAVNRTLSQLQRVFLLRNCTDSQFEGRTRPCLQYQIK
RCTAPCVGYITETEYRKSVKDAADFLSGKTAQIQENLAADMMAASEAMEFERAASLRDRI
KALTQVQTAQGINPRTVAEADIIALHTENGQACVQVFFIRANQNWGNFDFYPRISGDEDL
AEVMEAFVGQFYSDRDPPKALILSHGLDNEDLMAEALAEKAGRKVEITVPQRGEKAELVS
NALRNAKESLARKMSESATQMKLLRGIAEAFDLDAPPERIEVYDNSHIQGTNAVGAMIVA
GPDGFMKSQYRKFNIRGDSITPGDDFGMMKEVLTRRFARLQKEDPDRTSGNWPDLLLIDG
GAGQVSAVQEIMDQMGVTDVAMVGVAKGVDRDHGKEEFYRTGQRPFALQRNDPVLYFIQR
MRDEAHRFAIGTHRAKRSKAIGVTTLDDIPGVGATRKRALLAHFGSAKAVRGANLSDLLA
ADGISSAMAETIYAYFHENG
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacaacagtgacgcccctctgaccggatacgaccgcatcgcggcctatttgaaa
acgctcgatggctcaccgggcgtgtatcgaatgttggatgaagaaagtcgcgttttgtat
gtgggaaaagcgcgaaacctgcgcaatcgggtgtcgaactatgcgcgtcccggaaatcac
tcgggccgcatcgcgcggatgatttcggaaacggcgtcgatgatgttcctgacgacgcgg
acggaaaccgaggcgcttttattagagcaaaaccttattaagcaactcaagccgcgctac
aacgttcttctgcgcgacgataaatcgtttccaagcgtgctggtgaccgatcacgcgttt
ccgatggttaagaagcaccgtggtgcgaaaaaagagaagggccagtatttcggccccttt
gcgagcgctggcgcggtaaatcgcaccttaagtcagcttcaaagagtctttttgctccgc
aattgtaccgatagccagtttgagggacgcacccgtccgtgtctgcaatatcagatcaaa
cgctgcactgctccctgtgtcggctatatcaccgagaccgaatatcgaaagtccgtcaaa
gatgcggctgattttctatcgggcaaaacggctcagatccaagagaacctcgccgccgat
atgatggcggcgtccgaagcgatggagttcgaacgcgctgcatccctgcgagatcggatt
aaggcgctgacccaagttcaaacggcccaagggatcaaccctcggacggtggcagaggcg
gacatcatcgcgctccataccgaaaacgggcaagcctgtgtgcaggtgttctttattcgc
gcgaaccaaaactggggcaatttcgacttttatccgcggatcagcggagacgaagatttg
gcggaagtgatggaggctttcgtcggtcagttctactcagaccgtgatccgccaaaggca
ctcatcctgtctcatggcctcgacaacgaagacctgatggctgaggcattggccgagaaa
gcagggcgcaaagtcgaaatcacagtccctcagcgtggcgaaaaggccgagcttgtcagc
aacgcgctacgcaatgcgaaagagagccttgcgcggaaaatgtctgaaagtgctacgcag
atgaaactacttcgtggcatcgctgaggcattcgaccttgacgcgccgccagagcggatc
gaggtttacgacaactcccacattcagggcaccaatgccgtcggcgcgatgatagtggct
gggcctgacgggttcatgaaatcgcaataccgtaagttcaatattcggggcgatagcatc
acaccgggtgacgactttggcatgatgaaagaagtgctcactcgtcgatttgcgcgcctt
caaaaagaagaccctgatcggacgtcgggcaactggcctgaccttctgctgattgacggt
ggtgcagggcaggtgtcagcggtgcaggaaatcatggatcaaatgggcgtcaccgatgta
gccatggtcggtgtcgcaaaaggcgttgatcgtgatcacggcaaagaagagttttaccgc
acaggtcagcgtccctttgctctgcagcgcaatgatcccgttctctattttatacagcgc
atgcgcgatgaggcacaccgtttcgccatcggcacccaccgcgccaaacggtccaaagcg
attggcgtgacgaccttggacgatattccaggggttggtgcgacacgtaaacgcgctttg
cttgcgcactttggcagcgccaaagccgttcggggcgcgaatttgtcggatttgctggct
gctgacggcatttcgagcgcgatggcagagacgatttacgcatactttcacgaaaatggc
tga
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