Aestuarium zhoushanense: B9057_13910
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Entry
B9057_13910 CDS
T05514
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rbz
Aestuarium zhoushanense
Brite
KEGG Orthology (KO) [BR:
rbz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbz03400
]
B9057_13910
Enzymes [BR:
rbz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B9057_13910
DNA repair and recombination proteins [BR:
rbz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
B9057_13910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AUJ65306
LinkDB
All DBs
Position
complement(2786110..2789094)
Genome browser
AA seq
994 aa
AA seq
DB search
MMFEPTDKPRIFGLPPGVDFADSLTKGVMERLRGMPPEEVAKVEIFLNTRRMQRRTREVF
DNGPAGLLPRLRLVTDLARDPVAIDVPPPVASLRRRLELAPLVSNLLSKEPELAPRSALY
ALSDSLAKLMDEMHGEGINPQIILDLDVTDRSGHWDRSKKFIGIVLKYFDFLKSPPDVEA
RQRMVIERLITRWSDTPPTHPIIIAGSTGSRGATAMLMEAVSRLPQGAVILPGVDYDMPP
AIWDAMTDRRQFEDHPQYRFKLLMERLDLSISDIRPWDTTEVFSAARNRVISLSLRPAPV
TDQWLTDGKELGDLPSAMENVTLVEAPSPRSEAETIALRLRAAMDEGITAALITPDRMLT
RQVAAALDRWNIVPDDSAGQPLHLSAPGRLLRQVAGLRVDQITGESLLTLLKHPLVSSGG
NRGDHVRLTNELELSIRKKGPAYPTGADLRGWAEKDAQKDWAEWIAGLLDQIHSGPKPDD
DLPLPDHVAQHLALTEAFAAGPLAGESGLWDEAAGRKVKAVMADLTLHAEHGGALSARDY
SGIVGSILSGAEVRNPDISHPNILFWGTLEARVQSADLVILGGMNDGTWPETPTPDPWLN
RDMRLKSGLLLPERRIGLSAHDYQQAIAAKEVWITRAARSEEAQTVPSRWVNRLTNLLDG
LADQSGPEALKAMRERGSKWIKTAEAISAADKPRGTPAPRPSPCPPIEARPKELSVTQIQ
TLIRDPYAIYAKKVLGLYALNPLVPTADAPLRGNIIHDVLQKFISEDHDPATPAARDRLM
QLTKDELEAQCPWPATRRLWYARMDSAADWFLSTEVDRRKRGAPAKLEAWGEITLPDLDF
KLKGKADRIDKTDDGRVILYDYKTGTPPSEKQQLYFDKQLILEAAMVALGAFNDIGRKEA
LDAEFIPIKAGAKSVRAPILTDASPKKRKDSIEDLSVDDEWMKFQLLIKAWTDPARGYTA
MMAAETSAYGSDYDHLARYGEWNLSQAPKAEVLK
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttgaaccgaccgataagcctcgcatttttggcctgccccctggggtggatttc
gctgactccctaaccaaaggcgtgatggagcggctgcgggggatgccgcccgaagaggtc
gccaaggttgagatcttcctgaacacacgtcgcatgcagcgccgaacgcgcgaggttttc
gacaatggtcctgcgggactattgccacgactgcgtctggtcactgatctcgcgcgcgat
cctgtggcaatagacgtgccgccccccgttgcgagcctgcgtcgtcggttggagttggcg
ccacttgtgagcaacttgctctcaaaggagcctgaattagcaccgcgttcggcactctac
gcgctctcagacagcctcgccaaactgatggacgaaatgcatggtgaggggatcaatcca
cagatcatcttggacctagacgtgacagataggtcaggccactgggatcgctccaagaaa
tttatcggaatcgttctcaagtattttgattttcttaagtcgccacctgacgtcgaagcc
cgtcagcgcatggtgatcgaacgcctcattacccgttggtctgacacgcccccgacgcac
ccgatcattatcgcgggttcgacaggctcgcgtggcgcaaccgcgatgttgatggaggcc
gtatcacgcctgccccaaggcgcggtgatcctccctggtgtggattatgacatgcccccc
gcaatttgggacgccatgaccgacagacgacagtttgaggaccatccccagtaccgcttt
aaactgctgatggagcggctagacctttcgatttcggacatacggccttgggacacgacc
gaagtgtttagcgcagcgcgtaatcgggtgatttcgctatcgctgcgccctgcccctgtg
accgatcaatggctgactgacggcaaagagttaggcgacctacccagcgcgatggagaac
gtgaccttggtcgaggcgccctctccaagatcagaggccgaaacgattgcgttacggctc
cgcgctgcaatggacgaagggataacggccgcgctgatcacacccgaccgaatgctcacc
cgtcaggtggcggcagcgttggatcgctggaacatcgttccagatgactctgcaggtcaa
cctttgcacctttccgcgccggggcgattgctgcgtcaggtcgctggtttgcgtgtcgat
caaatcacgggcgaaagcctcctcacgctgttgaaacatcccctggtgtcatcgggtggg
aaccgtggcgaccatgtccgtctaacgaacgaactggagctctcaattcgcaagaaaggc
ccagcctatccaacgggtgccgacctgcgcgggtgggcagaaaaggatgcacaaaaagat
tgggccgaatggatcgcggggttgctcgatcaaatccatagcgggccaaagcctgacgat
gatctgccgcttcctgatcacgtggcgcagcatctcgcgctgaccgaagcctttgccgct
ggcccgctggctggcgaaagtgggctctgggacgaagccgctggtcgtaaggttaaggcg
gtgatggctgatcttacgctgcacgccgaacacggtggtgcgctgtcggcacgtgactat
agtgggattgttgggtcgattttgtcaggtgccgaagtccgcaatcccgacatcagccat
ccaaacattctgttttgggggacactagaagcccgtgttcaaagcgccgacttggtgatt
ttgggcggaatgaacgatggtacgtggcctgaaacgccaacgcctgatccgtggttgaac
agggatatgcggctgaaatcgggtcttttgctgcccgaacgccgcattggtctgtccgcc
cacgactatcagcaagccatcgcagccaaggaagtctggatcacccgtgcagcgcgatcc
gaggaagcccagaccgtgccatcgcgctgggtgaaccgattgaccaacctgctcgacggt
cttgcggatcagtctggacccgaggcgctaaaggcgatgcgagagcgcgggtcgaagtgg
atcaaaaccgccgaagccatcagcgcggccgacaaaccacgcggcacccctgcgccccga
ccatcgccctgcccgcctatcgaggctcggcccaaagagctatccgtcacgcaaatccaa
acgctgatccgcgatccatatgcaatctacgcgaaaaaggtgctcgggctttatgcgcta
aaccctctggttcccacggcggatgccccgttgcgcggtaacatcatccacgacgtcctg
cagaagttcatcagcgaggatcatgatcccgccactcctgcggcgcgtgatcgtttgatg
caactcaccaaagacgaactggaggcgcaatgtccttggcctgcgacacggcgactttgg
tatgcgcggatggacagcgctgcggattggttcctctcgaccgaagttgaccgtcggaaa
cgcggtgctcctgccaagctcgaagcgtggggggaaatcaccctccccgaccttgatttc
aaactcaaaggcaaggccgaccgaattgataagaccgacgacggtcgggtcatcctttac
gattacaaaacgggcaccccgccgagcgagaaacagcagctctactttgacaaacagctt
atccttgaggcggccatggttgcgctgggcgcgttcaatgacattggccgcaaagaggcc
ttggatgcggaattcatcccaatcaaagcgggtgcaaaatcggttcgtgcgccgatcctg
acggatgcctccccgaagaagcgcaaagattcgatagaggatctatccgtcgatgatgaa
tggatgaagttccaactcctgatcaaagcctggaccgatcctgcgcggggatacacggcg
atgatggccgccgaaacctcggcctatggcagcgattacgatcaccttgcgcgatatggt
gaatggaacctcagccaagcgcccaaagcggaggttctgaaatga
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