Roseiflexus castenholzii: Rcas_0136
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Entry
Rcas_0136 CDS
T00585
Name
(GenBank) transcriptional regulator, TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
rca
Roseiflexus castenholzii
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rca03000
]
Rcas_0136
Transcription factors [BR:
rca03000
]
Prokaryotic type
Helix-turn-helix
Other families
Rcas_0136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
HTH_11
DUF5817_CT
PLDc_2
MarR_2
PadR
GntR
Penicillinase_R
Motif
Other DBs
NCBI-ProteinID:
ABU56271
UniProt:
A7NFP5
LinkDB
All DBs
Position
complement(165154..165939)
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AA seq
261 aa
AA seq
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MDVLEQLTTLGFTEYEAKVYLALLQEHPATGYQIGKLAGVPRSMVYEALGRLEARGAVLK
SFDEKATLYRPVSPDILLDRYEQRVRQRVAELRSSLAPLYRRHDEGRLWTFSGRREALHY
AREMIERAQIELLLVLTDDDVAELREALTAAHARGVRLGVILTGNAPFDLGQVVRHPHLE
TTLHQMEETLMIVADDRECLIASGHATTSATVTTNPNLVSLAHQFVWMELFAQRIFARLG
EDLLARLDPDDRRILQHEENA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcctcgaacaattgacgacgctggggtttaccgaatacgaggcgaaggtctat
cttgcgctgttgcaggagcacccggcaaccgggtatcagatcgggaaactggccggcgtg
ccgcgctcgatggtctatgaggcgctcgggcggctcgaagcgcgtggcgccgtgctcaaa
agcttcgatgaaaaagcgacgctctatcgcccggtgtcgcccgatatcctgctcgaccgg
tatgagcagcgggtgcggcagcgcgttgcggagctgcgcagcagcctggcgcccctctac
cgccgtcacgatgaagggcggctgtggacgttcagcggtcgtcgggaggcgttgcactat
gcccgcgagatgattgagcgcgcgcagatcgaactgttgctcgtgttgaccgacgacgac
gttgctgaactgcgcgaggcgctgaccgccgcccacgcgcgtggcgttcggctcggcgtc
attctgacgggcaacgcaccgttcgatcttggtcaggtggtgcgccatccgcatctggaa
acaactctgcatcaaatggaggaaacgctgatgatcgtggcggacgaccgcgagtgcctg
atcgccagcggtcatgccacaacgtcggcaaccgtcacaacgaacccgaacctggtttca
ctcgctcatcagttcgtctggatggaattgttcgctcaacgtatttttgcgcgcctgggg
gaagacctgctggcgcgcctggacccggacgatcgccgtattcttcaacacgaggagaat
gcgtaa
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integrated database retrieval system
