Roseiflexus castenholzii: Rcas_0215
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Entry
Rcas_0215 CDS
T00585
Name
(GenBank) Tetratricopeptide TPR_2 repeat protein
Organism
rca
Roseiflexus castenholzii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_16
TPR_14
TPR_8
TPR_1
TPR_11
TPR_12
TPR_17
TPR_9
TPR_7
ANAPC3
TPR_6
NatA_aux_su
TPR_15
TPR-S
NACHT
TPR_20
TPR_4
BTAD
TPR_21
Coatomer_E
AAA_22
ABC_tran
AAA_6
Motif
Other DBs
NCBI-ProteinID:
ABU56348
UniProt:
A7NFW7
LinkDB
All DBs
Position
265160..271948
Genome browser
AA seq
2262 aa
AA seq
DB search
MAVQLAGWAHRYLEALCGQSNFSAARTVAPLWLATDAAHTPEVGVPVSAPLTIQMAAEIF
PRLALIGPAGAGKTTSLRALAIGLAEAFLSGNSRTAWSGAHAPLPLYIELARFRGSIEAT
LADTFGIGAPPPLDELARDRPLLFLLDGLDELPPATQLTGLAALSHTLAATGAQTRWIST
CRSEYLGLFRPWLNGAEVRVLQPLRPRDVVAQLQRQVGDGAAAWIQRNDDILQLATRPRW
LTALIEAREALNAPIQSRGRLLATWMPALVTTALAAHPRSIPASQAVHALTTIAHLLEHQ
GQTELTLDSAITAIEVSAYVSDTQVTARALRQSPLVHERTLRAATGEAAILALIDAGILN
FDAERRLIGFHHPLLRSFAQALLLARTRPDQWSASILSRTWTDAVIFAYSLSEDREAVVR
RLLASGAVGLTARCLIDAEAPAHYDELLERSGSLTPPLRVMIADAFAAEGLDRAALEQLE
RAGNEGYDEAGLFGRLGDLYCRSGQWRLARVAYEQALAREADDLRYRQQLGVVCSRMGEL
EQAAAALETVLDAQQKRSAAAAHELGHVYLQQGRFARALEAYRHAAQQQPGEPAYRRSVA
VALRRLGRLEEAEAELRDLIAASGSDAATYAELGEVYADAGHNAKAVESYARAVALRPDD
PMLYARLGQVRRSIGDWSGARAALQRAVELDSSNAALQDELGQALEACGEMESALAAYRA
AVSLDPQCATYHRRLGALLRNCGDNDGAAAALRTALELRPDSAATYGELAELLWRTGDTD
QALDAYRRAHALAPESPDHTRALGLAYRRLGRSRDAERLLRQALTLAPERADLHYDYGIA
AEALEQWDTALAAYEQAAMLDPQCADYARAAGALLLRRGDLARARSLLAVALRRARRDPE
TLFQVGMLHAAAGAWHLAARSFQRAARLSGSAQHESALGRAYLHLSMADEACAAFERALL
LHPDDIETLDAYQTALESCGRLEAAYSVGRRVARLAPGNAAIQQRVGSLALRLGRVNEAL
ELLDRAVALDSRLVAAHLDRSRALLAAGRAEAALAAAQQAHTLAPDQALPLALAAEALIT
LRRDDEARPLLERALALDATLLSSCVALRDLLARADDYAAAVSLAQRAVALAPADISHHV
RLGELLLETGDLTQAEQALQYALQYIASVDEEQRNRMSARIYALISRIRARIADWEQAVA
YARASVDCAPGNSEYRALLADALEGAGNLAAAVAELESAAAAEPDRIDWQQRLGHFLYRI
GNYSGALNALRRAAAGSGAAEDYYALGRCLCALSDLPAAAEALEQALRLRPDAASWRVEL
ALVHLERGWHGEALAELNQAVATAPDRTEVRRARARALMAIGQLDHARADLVEALRREPR
DAESYALLAEILLDLGHTLQALDSARRAATLQPDNPQYRRMLARALRASGRRAEAIEHLS
GVVNDTSPPQWWEELADDHLALGHLPAARIALEHAVAAAPDQATTRFRLGDVLLRLGEPA
AATEQLRIAITRRPDYAAAHARLAEALIASAIDSPDHLAAAVEAARLAVAVEGQCADHWR
VLGAVLRMQGVLEDAVQALRRACELDPESASAAFLLGLTLLEQNNPAAAIAPLADAVALA
PEIASHHGCLGIAHRLAVAPIVEPDDLRTAPPNRRAALTIARRSFQQAITLDPRCARWWY
ELGLTEQQSANHAPAVEAFARAMALADDHAVSMTTGVYPPLQGSERIAILRSRALSLYLV
GRLDDARADLESVIAHNAALPADRYLLGRVLLDCGHATAARTELTSATASDPRHAQAHLF
LGRACLALNEPQTAIDAIEQAAELRPDHAPTAAALSQAYAAAGRRERAIAAAQRAVRLDS
SAGEHHHLLATLYAASGRLQEARAALINALTLQPDVAAWHAQMGDICQRMGMIDAARSAY
ARAVQLAPDHADYRYAQARLLRQQGRIDEARQVFEKALEHEPQQGAWHYELAELLRQQRD
PAAIEHYAAAVQLAPDEPRHWLGLVEGLLERQERDAAQETVERALLRFGDHAALHAVAGA
LQEEQGEIERAAWHYEQALTRDPQNATYCWRLGRAQFELGNPDAARELLERALALDPGSA
DAHATIARLFASENDSRAALVHSQRAVELRPDDPALQIQLAEVLAQMRRFDEARQALERA
VQRAPSDPELLARYGEMALTVGLYHEALGAFERAIAQRPDEPRYHFFAGRAHRRLKQYSR
AIERFRRAVKLRPGYSEAVIELSTLGPLAFVAQHLRGESDAA
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcaactcgctggctgggcgcatcgttacctggaggcgctttgcggtcaatcg
aacttcagcgccgcgcggactgtcgcacccctctggttggcgaccgatgccgctcatacg
cccgaagtgggagtccctgtctccgcgccactgacgattcaaatggcagcggaaatcttc
ccgcgcctggcgctgatcggtccggcaggcgccggtaaaacaacaagcctgcgggcgctg
gctatcgggctggcagaagcgttcctttcgggcaatagtcgcacggcatggagcggcgca
catgcccctcttccactctacatcgagctggcgcgtttccggggaagcatcgaagcaaca
ctggcggacacattcggcattggagcgccgccgccgctcgacgaactggcgcgcgatcgt
ccgctgctcttcctgctcgatgggctggacgaacttccgccagccacacagctcaccggt
ctggcggcactgagccacaccctggcagcgaccggcgctcagacgcgctggatcagtacg
tgtcgcagcgagtatctggggctgttccgcccctggctgaacggcgctgaggtgcgtgtg
ctgcaaccgctccgtccgcgcgatgtcgttgcgcaactgcaacgtcaggtcggcgatggg
gcggctgcctggattcagcgcaacgacgatattctgcaactggcgactcgaccgcgctgg
ctcacggcgctgatcgaagcgcgtgaggcgctgaatgcgcccattcagagccgcggacgg
cttctggcaacctggatgcccgcgcttgtgacaacagcgctggcagcgcatccgcgctcg
atcccggcatcacaggctgtacatgcactcacgaccattgctcaccttctcgaacaccag
gggcagaccgaactcacgctcgacagtgcaatcacggccatcgaagtaagcgcctatgtg
tccgatactcaggttacagcgcgtgcgctgcgtcaatcaccattggtgcacgaacgaacg
ctgcgcgccgcaaccggcgaagccgcgattctggcattgatcgatgccggtattctgaac
ttcgatgccgaacgacgactgatcggcttccatcatcccctgttgcgttcttttgcccag
gcgctgctgctggcgcgcacacgccccgatcagtggtccgcttccattctgagccgcact
tggacggatgccgtgatcttcgcctacagcctgtccgaggatcgtgaggcggtggtgcgg
cgcctgctggcttctggcgccgttgggttgacggcgcgctgcctgatcgacgcagaagcg
cccgcgcactacgacgaactgctcgagcgcagcggctccctgacgccaccgttgcgagtg
atgatcgccgacgcgtttgctgccgagggtctggatcgcgcagcgttggagcaactggag
cgcgccggcaacgaagggtacgacgaagccgggctgttcggtcgcctgggcgatctctac
tgccgatccggtcagtggcggctggcgcgcgtcgcttatgagcaggcgctggcgcgcgaa
gccgacgatctgcgctaccggcagcaactcggggtcgtatgcagccggatgggtgagctg
gaacaggcggcggcagcgctggaaacggtgctcgatgcgcagcaaaagcgttcggcagcc
gctgcgcacgaattaggacacgtctatctccaacagggtcgcttcgcgcgggcgctggag
gcatatcgccacgcggcacagcaacaacctggcgaaccggcatatcggcgtagtgtggcg
gtcgcgctgcgccgtctggggcgtctcgaggaagcggaagcggaactgcgcgacctgatc
gccgcatctggcagtgatgcggcgacgtatgcagaactcggcgaggtctatgccgacgcc
gggcataacgcgaaagcggtcgagagttatgcgcgcgccgttgccctgcgccccgatgac
ccgatgctctatgcgcgtctggggcaggtgcgtcgcagcattggcgactggtccggcgcg
cgcgctgcattgcaacgcgcagtggaactcgattcctcgaacgctgcgttgcaggatgaa
ttgggacaggcgctcgaagcatgcggtgaaatggagagcgcgctggcagcataccgcgcg
gcggtctcgctcgatccgcaatgtgccacatatcatcgtcgtttgggagcgctcctgcgc
aattgcggcgacaatgacggcgctgcggcggcgctgcgcacggcgctcgaattgcgcccg
gacagcgccgcgacctatggcgaactggcagaacttttgtggcgtaccggtgacaccgat
caggcgctcgacgcctatcgacgtgcgcacgctctcgcgccggaatcccccgatcacacg
cgcgcgttgggtctggcataccgccgccttggacgatcacgcgacgccgaacgcctcctg
cgccaggcgctgacgttggcgcctgaacgcgccgatctccactacgactatggcatcgct
gctgaagccctcgaacagtgggacacggcgcttgcagcatatgaacaggcagcgatgctc
gatccgcaatgcgccgactatgcgcgcgccgccggtgcgcttctcctgcggcgcggcgat
ctggcgcgggcacgttcattgctggcggtcgccctgcggcgcgcgcgccgtgatcccgaa
acgttgtttcaggtgggaatgctccatgcggctgccggcgcctggcatctggcggcgcgt
tctttccaacgcgcggcgcgcttgagtggcagcgcacagcacgaaagcgcacttggcagg
gcgtacctgcacctgagtatggcagacgaagcatgcgccgcttttgagcgcgcactcctt
ctgcaccccgacgacatcgaaacactcgacgcctaccagacggcgctagagtcatgcggt
cgtctcgaagcggcttactccgttgggcggcgtgttgcgcgtctggcgccagggaatgcg
gcgatccagcagcgcgtcggcagtctggcgttgcgcctggggcgcgtgaacgaggcgctc
gaactgctcgaccgtgcagtggcgctcgactcgcgcctggtcgcggcacatctggatcga
agccgggcgctcctcgcggcaggacgggcagaggcagcactggcagccgcacaacaggcg
catacccttgctcctgatcaggcgcttcccctggcgctggcagccgaggcgctcatcacc
cttcggcgtgatgacgaagcgcgcccattgctggaacgagcgctggcgctcgatgccacg
ctgctgtcttcctgtgttgcgctgcgcgacctgctggcgcgtgctgacgactatgctgcg
gctgtgagcctggcacagcgcgctgtagcgcttgcacccgccgatatctcccatcacgtg
cggttgggcgagttgctcctggaaacaggcgacctgacacaggcggaacaggcgctgcaa
tacgcacttcaatatatcgccagcgtcgacgaagagcagcgtaaccggatgagcgctcgc
atttatgcactaatcagccgcattcgcgcccgcatcgccgattgggaacaggcggttgcg
tatgcgcgtgcaagcgtcgattgcgctccgggcaacagcgagtatcgtgcattgctcgcc
gatgctctggaaggcgccggcaacctcgcagcggcagtcgcagaactggaaagcgccgct
gctgccgaacccgaccgcatcgactggcagcagcgtctagggcatttcctgtatcgcatc
ggcaactactcaggggcgctgaatgcactgcgccgcgcagctgcggggtccggcgccgcc
gaggactactatgcgctcggcaggtgtctgtgtgcgctcagcgatcttccggctgccgcc
gaagcgctcgaacaggcgttgcgcctgcgccccgacgccgcatcctggcgcgtcgaactg
gcgctggtgcatctggaacgcggctggcatggcgaagccctggcggaacttaaccaggcg
gttgcaaccgcccctgatcggacagaggtgcgacgcgcccgcgctcgtgcgctgatggca
attggccaactcgaccacgcgcgcgccgatcttgtcgaggcgttgcggcgtgaaccacgc
gacgccgaaagttatgcgttactcgccgaaatcctgctcgatctcggtcataccctccag
gcgctcgatagcgcccgacgcgctgcaacgctgcaacccgacaatccgcagtatcggcgc
atgctggcgcgcgcgctgcgcgccagcggtcgacgcgcagaagccatcgaacacctcagc
ggcgttgtgaatgataccagcccgccgcagtggtgggaagaacttgccgatgatcacctg
gcgctgggtcatcttcctgctgcgcgcatcgcactcgaacacgccgttgccgctgcaccc
gatcaggcgacgacgcgctttcgccttggcgacgtgctgctgcggcttggcgaacccgcc
gctgcgacagaacaattacgcatcgccattacccgccggcccgattacgctgctgcacat
gctcgtcttgcagaagcgttgattgcgagtgcgatcgacagccccgatcatcttgctgct
gcggtcgaagcagcgcgcctcgccgtagcggtggagggtcaatgcgccgaccattggcga
gtgctcggcgccgtgttgcgcatgcagggggttctggaagacgctgttcaggcattgcgc
cgcgcctgcgaactcgatcccgaatcggcgtctgccgcattcctgcttggattgacattg
cttgaacagaacaatccggcagccgccatcgcaccactcgcagatgcggttgcgttagcg
cctgagatcgcgtcgcaccacggatgcctgggaatcgcccaccgtctggcagtcgcacca
attgtcgagcctgacgacttgcgcacagcgccgcccaatcggcgcgcagcgctgacgatc
gcgcggcggtcgttccagcaggcgatcacccttgacccgcgctgcgctcgctggtggtac
gaacttggactgacggaacagcagtctgccaatcatgctcccgctgtcgaagcattcgcg
cgcgctatggcgctggcggatgatcacgctgtcagtatgacaaccggtgtctaccctccg
ctgcagggcagcgaacggatcgccatcctgcgcagccgcgcactgtcgctctatctggtc
ggtcgcctcgacgatgcgcgcgccgatcttgaatcggtgattgctcacaatgctgcgctt
ccggcagaccggtatctgctgggtcgggttcttctcgattgtggtcatgccacagcagca
cgcacggaactgactagtgccaccgccagcgatccacggcacgctcaggcacacctgttt
ctcggacgcgcctgcctggcattgaatgaacctcagacggcgattgacgccatcgaacag
gctgccgaactgcgccccgatcatgcgccaaccgctgccgccctcagccaggcatacgcg
gcagccggtcgacgcgaacgtgcaattgccgccgcacaacgcgccgtccggctcgactcc
tcggcaggcgagcatcatcacctgcttgccacactctatgccgccagcggacgcctccag
gaagcgcgcgctgctctgatcaatgccctgaccctgcaacccgacgttgccgcatggcat
gcgcaaatgggagacatctgccagcgcatggggatgatcgacgcggcgcgtagcgcctat
gcgcgcgccgtgcaactggcgcccgaccatgccgattaccggtatgcgcaggcgcgcctg
ttgcgccagcagggacgcatcgacgaggcgcgccaggtgtttgaaaaagcgttggagcac
gaaccgcagcagggcgcctggcactacgaactggccgaactcctccgccaacagcgcgac
ccggcagccatcgaacattatgccgccgccgtccaactcgcgcccgacgagccgcgccat
tggctggggctggtcgaaggactgctggagcgtcaggagcgcgacgcggcgcaggaaacc
gtcgagcgagcgctcctgcggtttggcgaccatgctgcgctgcacgcggttgccggtgcg
cttcaggaggagcagggcgaaatcgagcgggcagcgtggcactacgagcaggcgctcacg
cgcgacccgcagaacgctacctattgctggcggttgggacgcgctcaattcgaactgggc
aacccggacgccgcccgtgagttgctcgaacgggcattggcgctcgatcccggctcggca
gacgcgcatgcaaccatcgcgcgcctcttcgcatccgaaaacgatagccgcgctgctctt
gttcacagccagcgcgccgtagaactgcgccctgacgatcccgcgcttcagattcaactg
gcagaggttcttgcgcagatgcgacgctttgatgaggcgcgccaggcgctcgagcgcgca
gtgcaacgcgcgccgtccgatcccgaactactggcgcgctacggtgagatggcgctgacg
gtcgggttgtatcacgaagcacttggcgcattcgagcgcgccattgcgcagcgccccgac
gaaccacggtaccacttcttcgccgggcgcgcgcatcgccgactgaaacagtacagccga
gccattgagcggttccgccgcgccgtcaaactccgtcccggctacagcgaggcggtgatt
gaactcagcaccctcggaccgctggcgtttgtggcgcaacatttgcgtggcgagagtgat
gctgcatag
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integrated database retrieval system
