Roseiflexus castenholzii: Rcas_0328
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Entry
Rcas_0328 CDS
T00585
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rca
Roseiflexus castenholzii
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rca03032
]
Rcas_0328
03400 DNA repair and recombination proteins [BR:
rca03400
]
Rcas_0328
Enzymes [BR:
rca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Rcas_0328
DNA replication proteins [BR:
rca03032
]
Prokaryotic type
DNA Topoisomerases
Rcas_0328
DNA repair and recombination proteins [BR:
rca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rcas_0328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF4576
Motif
Other DBs
NCBI-ProteinID:
ABU56460
UniProt:
A7NG73
LinkDB
All DBs
Position
complement(403944..406415)
Genome browser
AA seq
823 aa
AA seq
DB search
MEIGIVRTRNITEEMRSAYLDYAMSVIVSRALPDARDGLKPVQTRILYGMWDMGIRANQP
FKKCARIVGEILGKMHPHGDSAVYDALVRLAQPWNMRYPLVEGQGNFGSVDGDPPAAMRY
TEARLTPIAEEMLADIEKNTVDFRDNFDGQYREPVVLPARIPNLLLNGAAGIAVGMATNI
PPHNLSEVCDAITHLIDNPDATVEDLVKILPGPDFPTAGMILGTEGIMNAYSTGRGHIII
RAKAHIEEAARGAFHIVVTELPYQVNKARLQERIAELARDRKIEGIRDVRDESDRSGMRL
VIILKQDAQPKKVLNALYKHTQMQTTFGVNMLALVEGGRQPRLLTLKRMLQEYIDHRREV
IRRRTEFDLDKARARAHILEGLKIALDHLDAVITTIRNSRSRDNARANLMNGFALSEAQA
NAILEMQLGRLAALERQRIEEEYREVIRLIGELEDILANPRKILHLIKQDLADLKAKYGD
ARRTRIIPEANGEVSDDDLIPDVKVLITLTDRGYVKRQSPDVYRTQRRGGRGIRGATTRE
QDVVRHILAANTMDDLLFFTDRGKVYQIKAHELPDASRTAKGLPLVNLIALEPGEQVTSV
LAVPDFEKAEYLIMATVRGKIKRTSIREYSQVRSNGLIAIGLEEGDELGWVAMTQGHEDV
LLTTARGQTIRFRQEEVRPMGRPATGVIGIALAEGDRVVSMDLAQENAALLVVTAHGYGK
RTDLGEYPLKGRATGGVITIRLRPGDEVAVAHVVRENSLLTIITESGMVMRTEASGISMF
GRNTQGVTIVNLTSNDRVAALCVEAPDENEERSERVLIDPTQG
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgggatcgtccgaacgcgcaacattaccgaagaaatgcgcagcgcctacctc
gattacgcaatgagcgtcatcgtctcgcgtgcgcttcccgatgcccgtgacggattgaaa
ccggtgcagacgcgcattctgtatgggatgtgggatatgggcatccgggcgaatcagccc
ttcaagaaatgcgcccgtattgttggcgaaatcctgggcaaaatgcatccccacggcgat
agcgctgtctatgatgcgctggtgcgcctggcgcaaccctggaatatgcgctacccgctt
gtcgaagggcagggcaacttcggcagcgtcgatggcgacccgccggcggcgatgcgctac
accgaagcacgcctcacgccgatcgccgaagaaatgctcgccgacatcgaaaagaacacc
gttgattttcgcgacaacttcgacggtcagtaccgcgagccggttgtattgccggcgcgc
atccccaacctgctgctcaacggcgcggctggcatcgccgtcggtatggcaacgaacatc
ccgccccacaatttgagcgaggtctgtgatgcgatcacccacctgatcgataaccccgac
gccacggttgaagatctggtgaaaattttgcccggtcccgattttccaactgctggcatg
atcctcggtacggaagggatcatgaacgcctatagcaccgggcgcggtcacatcattatt
cgggcaaaagcgcacattgaagaagcggcgcgtggcgcattccatattgtcgtaaccgaa
cttccctaccaggtcaacaaggcccgcctgcaagagcgtatcgctgaactggcgcgcgac
cgcaagatcgagggtatccgcgacgtgcgcgacgagtccgaccgcagcgggatgcgactg
gtcattattttgaagcaggacgcgcaaccgaagaaggtgctgaatgcgctctataagcac
acgcaaatgcagacgacgtttggtgttaatatgctggcgctcgtcgagggtgggcgacag
ccgcggctgctgacgcttaagcgcatgcttcaggagtacatcgaccatcgccgcgaggtc
atccgccgccgtactgaattcgacctcgacaaggcgcgggcgcgcgcccatatcctcgaa
ggtctcaagattgcgctcgaccatctcgatgcagtgattacgaccattcgcaattcacgc
tcacgcgacaatgcgcgcgcgaacttgatgaacgggtttgccctcagtgaagcgcaggcg
aacgcgatcctggagatgcaactgggtcggcttgcggcgctcgaacgtcagcgcatcgag
gaggagtaccgcgaggtcattcgactgatcggcgaactcgaggatattctggcgaacccg
cgtaagattctgcacctgatcaaacaggaccttgccgatctgaaggcgaagtatggcgat
gcgcgccgtacccgcatcatccctgaagccaatggtgaggtgagtgacgacgatctgatc
ccggatgtcaaagtgctgatcaccctcaccgaccgcggctatgtcaaacgccagtcgccc
gatgtctaccgaacgcagcggcgcggcggacgcggcatccgcggcgccacgacccgcgaa
caggacgtggtgcgccatattctcgccgccaacactatggacgacctcctcttcttcacc
gaccgcggcaaggtctatcagatcaaggcgcacgaactgcctgatgccagccgcactgcc
aaaggtttgccgctcgtcaacctgattgcgctcgaacccggcgaacaggtcacatcagtg
ctggcagtgcccgacttcgagaaggcggaatacctgattatggcaacagtgcgcggcaag
attaagcgcacatcgatcagggagtacagtcaggtgcgttccaatgggttgatcgccatc
ggactcgaagagggcgatgaactcggctgggttgcgatgacccaggggcacgaggatgtg
ttgctcaccaccgcgcgcgggcagacgatccgcttccgccaggaggaggtgcgcccgatg
ggacgaccggcaaccggtgtgatcggtattgcgctcgccgagggggatcgggtggtctcg
atggacctggcgcaggagaacgcggcgttgctggtggtgacggcgcatgggtatggcaag
cgcaccgatctgggagaatacccgctcaaagggcgcgccaccggcggtgttatcacgatc
cgactccgccccggcgacgaggttgccgttgcgcatgtggtgcgcgagaactcgctcctg
accatcatcaccgagagtggcatggtgatgcgcaccgaagccagcggcatttcgatgttc
gggcgcaatacccagggtgtgaccattgtcaacctgacatcgaacgaccgcgtggcagcg
ctgtgcgtcgaagcgccggacgagaacgaggagcggagcgagcgcgtgctgatcgacccg
acccaggggtga
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