Roseiflexus castenholzii: Rcas_0552
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Entry
Rcas_0552 CDS
T00585
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rca
Roseiflexus castenholzii
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rca03009
]
Rcas_0552
Enzymes [BR:
rca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Rcas_0552
Ribosome biogenesis [BR:
rca03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Rcas_0552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
MTS
Methyltransf_25
Methyltransf_31
TRAM
Methyltransf_11
Cons_hypoth95
Methyltransf_12
Methyltransf_23
Methyltransf_4
Methyltransf_15
NodS
TRM5-TYW2_MTfase
PCMT
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
ABU56682
UniProt:
A7NGT5
LinkDB
All DBs
Position
733329..734648
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AA seq
439 aa
AA seq
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MSVTLADLSEQTLSSTWPDTLELTLDGIAQGGEAVGRWQNRVVFAAGGIPGERVVVRLRE
RHESYARGDVIDVLLASPDRVAPRLPGASHMPWQHIAFDAQQRLRRQILADQLAKFAGVD
PAVVEATAFASKPWEYRNNTRLHCDGRRIGYYESNTRSIAELDHDPLLHPVLNEALAALR
SALADELDDAPPLEVTLRVSEAYGYCIAALRGRGDRRSLAARWRARCPVLAGVVFTVPPP
HMLPPLGADTLVEELADLTFLLRPTTFFQVNVAAAATLLNLIRAGLGDEARGRLLDLYCG
AGAFTLPLARNAIEIVGVEEYAGAVADAERSAAVNHISNVRFITGSAEAVLANLDGPFDA
VVLDPPRRGCHPRVLHALIERAPRRIVYVSCHPATLARDLKTLIAGGYAVVRATPVDLFP
QTPHIESVVALMRAGSAQV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtgactttggctgatctctccgagcaaacgctatcgtccacatggcccgacacc
ctggaactgacgctcgatggcatcgcgcagggcggtgaagcagtcggacgctggcagaac
cgggtagtgttcgcggctggcggcattcccggcgagcgggtcgtggtgcgactgcgggaa
cggcatgagtcgtatgcgcgcggcgatgtcatcgacgtgctgcttgcctcacccgaccgc
gtcgctccacgtctccccggcgcgagtcatatgccctggcaacatattgcattcgacgcg
caacaacgcctgcgccgccagattctggccgatcaacttgccaagtttgccggcgtcgat
ccggctgtggtcgaagcgacagcgtttgcctcaaaaccgtgggagtaccgcaataacacc
cgtctgcactgcgacggacgacggatcggctattacgagtccaatacccgctcaatcgca
gaactcgatcacgacccactgctgcacccggttttgaatgaagcgttggcagctctgcgg
agcgcacttgccgatgaacttgatgatgcgccgccgctcgaggtgacgctgcgtgtcagc
gaggcgtatgggtactgcatcgcagcgctgcgcgggcgcggcgaccgccggagtctggcg
gcgcgctggcgggcgcgttgtccggttctggcaggcgtcgtctttaccgttccgccgccg
cacatgctgccgccgcttggcgccgatacgctcgtcgaggaactggcagatctgacgttc
ctgcttcgcccgacgaccttctttcaggtgaatgttgcagcggcggcaactcttctcaac
ctgatccgcgccggccttggcgatgaggcgcgcggtcgcctgctcgacctctactgcggc
gcgggcgcgttcacgctcccactggcgcgcaatgccatcgagatagttggcgtcgaggag
tatgccggcgctgtcgccgatgcagagcgcagcgccgcagtcaatcatatctcgaatgtg
cgcttcatcaccggcagcgccgaagcagtgctcgccaacctcgacggaccgttcgacgcc
gtggtgctcgacccgccgcgtcgcgggtgccatccgcgcgtgctgcacgccctcatcgag
cgcgcgccgcgccggatcgtctatgtctcgtgtcatccggcgaccctcgcgcgcgatctg
aagaccctgatcgctggcgggtacgcggttgtgcgcgcgacgccggttgacctcttcccg
caaacgccgcacattgagagtgtggtggcgctcatgcgcgcagggtctgcgcaagtgtaa
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