Roseiflexus castenholzii: Rcas_0934
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Entry
Rcas_0934 CDS
T00585
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
rca
Roseiflexus castenholzii
Pathway
rca03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Rcas_0934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
rca03011
]
Rcas_0934
Ribosome [BR:
rca03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Rcas_0934
Bacteria
Rcas_0934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
PCB_OB
S1_2
RNase_II_C_S1
CvfB_2nd
Motif
Other DBs
NCBI-ProteinID:
ABU57048
UniProt:
A7NHV1
LinkDB
All DBs
Position
1239605..1240771
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AA seq
388 aa
AA seq
DB search
MKAVPDNAVQETEDFDWTQMLDDYDYARPQRGEVREGVVMKIEDGGILVSIGTKREGIIP
IADVRAIGDEVLNNLKVGDRIQVYVQDPENRQGDLVLSLTMVQVARDWEEAARLSAEGGI
VQGQVIGYNKGGLLVQFNRIRGFVPASQVAQLHGRTAAEERQQALQRMVGQTIPLKVIEV
DRDRNRLVLSERSATQEWRKAQKQRLLTELQPGDILTGRVNQLTNFGAFIDLGGADGLAH
ISELSWQRVNHPREVLSPGQEVRVMVVEIDAERERIGLSLRRLQPNPWDTIDQRYSLGQL
VSGPVTNVAPFGAFVQIEEAVEGLIHASELDADPQAQPRDLLQPGQIITARIISLDKQRQ
RMGLSLRRNSADEPPPEETPVEAPSTDM
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagtacccgacaatgccgtccaggaaacagaagatttcgattggacgcagatg
ctcgacgactacgactatgcgcgtccgcaacgcggcgaggtgcgcgagggcgtggtcatg
aagattgaagacggcggtattctggtctcgattggcaccaagcgcgaagggatcattccg
attgccgacgtgcgcgctatcggcgatgaggtgttgaacaacctgaaggtgggcgatcgg
attcaggtgtacgttcaggacccggagaatcgccagggcgatctggtcttgtcgctgacg
atggtacaagttgcgcgcgattgggaagaagcggctcgcctgagcgctgagggcggcatt
gtgcagggccaggttattggctacaacaaaggtggcttgctggtacagttcaatcgcatt
cgtgggtttgtgccggcatctcaggtggcgcaactccatggacgcactgctgccgaggaa
cggcagcaggcgttgcaacgcatggttggtcagaccatcccgctgaaggtgatcgaggtg
gatcgtgatcgcaatcggttggtgctatcggagcgcagcgcaacgcaggagtggcgcaag
gcgcagaagcagcgtctgcttacggaacttcagccgggcgatattttgaccgggcgcgtc
aatcaactgacgaacttcggcgcattcatcgatctcggcggcgccgatggtctggcgcat
atctccgaattgtcgtggcagcgcgtcaaccatccccgcgaggtgctgtcgccagggcag
gaagtgagggtcatggtcgtggagatcgatgccgaacgtgaacgcattggtctcagcctg
cgccgccttcaacccaatccatgggatacaatcgatcagcgctactcgcttggacaactc
gtgagcggtccggtgacgaacgttgcaccgtttggcgcatttgtgcagatagaagaggcg
gtcgaaggtctgatccacgccagcgaactcgacgccgatccgcaggcgcagccgcgcgat
ctgttgcagcccggtcagatcatcacggcccgaattatcagcctcgataagcagcgccag
cgtatggggcttagcctgcgccgcaacagcgccgatgaaccgccgccggaggagacgccg
gttgaggcgccgtccaccgatatgtaa
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