Roseiflexus castenholzii: Rcas_1211
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Entry
Rcas_1211 CDS
T00585
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rca
Roseiflexus castenholzii
Pathway
rca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rcas_1211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rca03019
]
Rcas_1211
03110 Chaperones and folding catalysts [BR:
rca03110
]
Rcas_1211
03029 Mitochondrial biogenesis [BR:
rca03029
]
Rcas_1211
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rca04147
]
Rcas_1211
Enzymes [BR:
rca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Rcas_1211
Messenger RNA biogenesis [BR:
rca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Rcas_1211
Chaperones and folding catalysts [BR:
rca03110
]
Heat shock proteins
HSP60 / Chaperonin
Rcas_1211
Mitochondrial biogenesis [BR:
rca03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Rcas_1211
Exosome [BR:
rca04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Rcas_1211
Exosomal proteins of other body fluids (saliva and urine)
Rcas_1211
Exosomal proteins of breast cancer cells
Rcas_1211
Exosomal proteins of colorectal cancer cells
Rcas_1211
Exosomal proteins of bladder cancer cells
Rcas_1211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_CP76
HalX
Motif
Other DBs
NCBI-ProteinID:
ABU57308
UniProt:
A7NIK8
LinkDB
All DBs
Position
complement(1564948..1566579)
Genome browser
AA seq
543 aa
AA seq
DB search
MPKQLYFNEEARRALKRGVDIVADAVKTTLGPRGRNVSIDKKFGAPTVTHDGVTVAKEIE
LKDPFENMGARLLVEVATKTNDVVGDGTTTATVLAQSIVNEGLKMVAAGANPMLIKRGLD
KAVEAVVAELKSVAIPVRDRADIAHVAAISAADSEIGDLIAEVMEKVGKDGVITVEESKG
IAFEKEYTEGMQIDRGYISPYFVTNPERMEAELEDPYILITDKKISSIQDILPVLEKALQ
VTKNLVIVAEDVDGEALATLVVNKLRGTINALAVKAPGFGDRRKAMLQDIAILTGGTLIS
EEIGRKLDSATIEDLGRARRVVSDKDNTTFIEGRGDERAIRARIEQIRAQIETTTSDFDR
EKLQERLAKLAGGVAVLKVGAATEPELKEKKHRVEDALSTARSAVEEGIVPGGGVALLTA
IPALDRVQVTYEDEKYGVQILRRALEEPMRQLARNAGEDGAVIIDTVRRLQKEKNDKNIG
YNVLTGEFGNMIEMGIIDPVKVTRSAVQNAVSIAGLLLTTEALIADIPEEKPAAPTPGGG
MDF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcagttgtatttcaacgaagaggcgcgccgcgcgctcaagcgtggcgtcgat
attgtcgccgatgccgtcaagacgacgctcggaccgcgcgggcgcaatgtgtcgattgac
aagaagtttggcgcgccgaccgtgacccacgacggtgtaaccgtcgccaaagagatcgaa
ctgaaggaccccttcgagaatatgggcgcgcgcctgctggttgaagtcgctaccaagacg
aacgatgtcgtcggtgacggtacgacgacggcgacggttctggcgcagtcgattgtcaat
gaaggcttgaagatggtcgccgccggcgccaaccccatgctgatcaagcgcggactcgac
aaggcggtcgaggcggtggttgcggagttgaagagcgtcgccattccggtgcgcgaccgc
gccgacattgcacacgttgcggctatttctgccgccgatagcgagatcggcgatctgatc
gccgaggtgatggagaaagtcggcaaggacggcgtgatcaccgtcgaggagagcaagggc
attgctttcgagaaggaatacaccgaaggcatgcagatcgaccgcggctacatttcgccc
tacttcgtcaccaacccggagcgaatggaagccgaactcgaagacccctacatcctgatc
accgacaagaagatcagcagcatccaggacatcctgccggtgctcgagaaggcattgcag
gtcaccaagaacctggtcattgtcgccgaggatgttgatggtgaggcgctggcgacgctg
gtggtcaacaaactgcgcggcacgatcaacgcgctggcggtcaaggcgcctggtttcggc
gatcggcgcaaggcgatgcttcaggacatcgccattctgaccggcggtacgctcatcagc
gaagagattggccgcaaactcgacagcgccacaatcgaggaccttggccgcgcgcgccgc
gtcgtgtcggacaaggataacacgacgtttatcgaagggcgcggcgatgagcgcgccatt
cgcgcgcgcatcgagcagatccgtgcgcagatcgagacgacgaccagcgacttcgaccgt
gagaagttgcaggagcggctggcgaagctggcgggtggcgtggccgtgctcaaggttggc
gcggcgactgagccggagctgaaggagaagaagcatcgcgtcgaggacgcgctctcaacg
gcgcgttcggcagtcgaagaaggcattgtacccggcggcggcgtggcgttgctcaccgca
attccggcgcttgatcgggtgcaggtgacgtatgaggacgagaagtacggcgtgcagatc
ctgcgccgcgcactcgaggagccgatgcgtcagctggcacgcaatgccggtgaggacggc
gcggtgattatcgatacggtgcgccgcctccagaaggagaagaatgataagaatatcggc
tacaatgtattgaccggcgaattcggcaatatgatcgagatgggtatcatcgacccggtg
aaggtgacccgctcggcagtgcagaacgccgtgtcgattgccggtctgttgctgacgacc
gaggcgctgattgccgatattccagaggagaaaccggcagcgccgactccgggcggcggg
atggacttctaa
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