Roseiflexus castenholzii: Rcas_1235
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Entry
Rcas_1235 CDS
T00585
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
rca
Roseiflexus castenholzii
Pathway
rca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rcas_1235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rca02000
]
Rcas_1235
Transporters [BR:
rca02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Rcas_1235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ABU57332
UniProt:
A7NIN2
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All DBs
Position
1596285..1597181
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AA seq
298 aa
AA seq
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MAPLTRTETSRSVIERRAFSWTWLGVAPFFLFVAAFLIWPTLSIIAQSFLDQERRLSLQN
ILELGRPFIVSSYVYSLQLSAVTAIGGGALGGLLAYAITIGGLPRPLRDAVLSFSGVASN
FAGVPLAFAFIATLGQLGVVTQWLRSVGINLYPAFSLYSFWGLSIVYIYFQIPLMVLIMG
PAFEGMRREWREAAESLGATSWHYWRYVGLPILLPSILGTMVLLFGNAFGAHATAFQLTG
GGSQGNVVTILIGAQISSDALANPGLGNALALGMIVIMGVCIGLYTWLQRLSARWLRS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcgccactaacccgcacagaaacgagtcggtcagtcatcgaacgccgcgccttctcg
tggacgtggctgggtgtggcgcccttctttctattcgtggcagcgtttctgatctggccc
acactgtcgatcattgcacagagttttctcgatcaggagcgtcgcctgtcgttgcaaaac
attctggaattggggcgaccgttcattgtgtcgtcgtatgtgtacagcctgcaactcagc
gccgtgaccgctattggcggaggggcgctcggcgggctgttggcgtatgcgatcaccata
gggggattgccgcgcccgttgcgcgatgcagtgctcagtttctccggcgttgcgtcgaac
ttcgccggcgtgccgctggcgttcgcattcattgcaacgcttgggcaactgggagtggtc
acgcaatggctgcgttcggtcgggatcaacctgtaccctgccttcagcctctatagtttc
tgggggttgagcattgtctatatctactttcagattccgctcatggtgctgatcatgggt
ccggcgttcgagggaatgcgacgcgaatggcgcgaagccgccgagagccttggcgcaacc
tcgtggcactactggcgctatgtcgggttgcctattctgctcccttctatccttggcaca
atggtgttgctgttcggcaatgcgttcggtgcgcacgcgactgcctttcagttgaccggc
ggcggcagtcagggcaatgtggttactattctgatcggcgcgcagatcagcagcgatgcg
cttgccaaccccggtctcggcaatgcccttgcgctgggaatgatcgtcatcatgggcgtt
tgtattggtctgtacacctggctccagcgtctctcggcgcgctggctccgctcataa
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