Roseiflexus castenholzii: Rcas_1250
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Entry
Rcas_1250 CDS
T00585
Name
(GenBank) ABC transporter related
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rca
Roseiflexus castenholzii
Pathway
rca02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Rcas_1250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rca02000
]
Rcas_1250
Transporters [BR:
rca02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Rcas_1250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_16
AAA_22
AAA_25
DUF87
Motif
Other DBs
NCBI-ProteinID:
ABU57347
UniProt:
A7NIP4
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All DBs
Position
complement(1615551..1617383)
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AA seq
610 aa
AA seq
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MARTPFDDDEILGKAYDAALVRRLGVFIAPYWRRVALATALMFGGAAVELAPPFLVKQAI
DGPIAARDPAGILPLFGLYAAALLAAFGFRYGQTYIVQLVGQQVMVDIRTRIFSHIQRMS
LAFFDRNPVGRLITRLTNDVDALNEFITQGTVALLGDLVRLLFIVITMLLLNWRLALISF
IMFPAVMLASSIFQRIMRGVYRRVRQRIARINAFLNEQISGILVTQLFNREEQSRIRFAE
LSRDYLAAQLESNRTFAIFFPLINFLSVTAMALLLYFGGQAVLAGIATLGMLVAFIQYTD
QAFQPIRQIAERYNTFQSAMASAERIFRVLDTPATVVDPAHPRSLPSPVRGEITFKNVWF
TYDTEAAGPDGAGLTDSDDRWVLRGVSFTIPAGQAVAVVGATGAGKTSLVSLMARFYDIQ
RGSITLDGIDIRELRQAELRRHVSAVPQDPVCFSGSIASNIRLHDDSISDEQVRRAAEIA
RAAPFIERLPGGYEYEVRERGSNLSVGQRQLLAFARAIAFNPEVLLILDEATSSVDTETE
ALMQEALERLIHGRTSIVIAHRLSTIRHVDRILVLYKGRLVEDGSHDELLAKRGYYYRLY
QLQFAEEVRG
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcacaccattcgatgatgacgagattttagggaaagcctacgatgcggcgctg
gtgcgccgcctgggggtgttcatcgcgccctactggcggcgagtcgcgctggcgacagca
ctgatgttcggcggggcagccgtagaacttgcaccgccattcctcgtcaagcaggcaatc
gacggtccgattgcggcgcgcgatccggcgggcattctgccgctcttcgggttgtacgcc
gctgcgctgctggctgctttcgggtttcgttatggtcagacgtatatcgtacagttggtc
gggcagcaggtgatggtcgatatccgcacccgcatcttcagccatatccagcgcatgagc
ctggcattcttcgaccgcaaccccgtcgggcggctgatcacccgcctgacgaacgatgtc
gatgcgcttaatgagttcatcacccagggaacggtggcgctgctgggcgatctggtgcgc
ctgttgttcatcgtcattacgatgctgctgctgaactggcggctggcattgatcagtttc
atcatgtttcccgcagtcatgctggcatcgagtatatttcagcgcatcatgcgcggcgtc
taccggcgcgtccggcagcgcattgcgcgcatcaacgcctttttgaacgagcagatcagc
ggcatcctggtgacgcagttattcaaccgcgaagagcagagccgcatccgattcgccgaa
ctgagccgcgattatctggcggcgcaactcgagtcgaaccggacgtttgcaatcttcttt
ccgcttatcaacttcctttcggtgacggcgatggcgctgctcctctactttggcggtcag
gcagtgctggcgggcatagcgacccttggcatgctggtggcgttcattcaatacaccgat
caggcatttcagccgatccgccagatcgccgaacgttacaacaccttccagtcggcgatg
gcgtcggcggagcgcatcttccgtgtgctcgacacgcctgccacggtggtcgatccagcg
catccacgatcattgccgtcgccggtgcgaggtgagattacgttcaagaacgtatggttc
acctacgataccgaggccgccggtcccgacggcgccggtctgacggactcagatgaccgg
tgggtgctgcgcggtgtgtcgttcaccattccggccgggcaggcagtagccgttgtggga
gcgaccggcgccggcaaaacgtcgctggtgagcctgatggcgcgtttctacgatattcag
cgtggatcgatcaccctcgatggcatcgatattcgtgaattgcgtcaggcggagttgcgc
cgccacgtgagcgccgtaccgcaggacccggtgtgttttagcggatccattgcctcgaat
attcgcctgcacgacgatagtatcagcgatgagcaggtccggcgcgctgccgagattgcg
cgcgcggcgcccttcatcgagcggttgcccggcggctatgagtacgaagtgcgcgaacgc
ggcagcaatctgtcggtcggtcaacgacaattactggcatttgcccgcgcaattgcgttc
aaccccgaggtgctcctcatcctcgatgaagcgacatcgagcgtagacaccgaaaccgag
gcgttgatgcaggaagcgctcgaacgcctgatccacggacgcaccagcattgtgattgcg
caccggctttcgaccattcgccacgttgatcggatacttgtgctttacaagggacgcctc
gtggaggacggctcgcacgacgaactgctggcgaaacgcggctattattaccgcctgtat
caacttcaattcgcggaagaggtcaggggttag
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