Roseiflexus castenholzii: Rcas_1251
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Entry
Rcas_1251 CDS
T00585
Name
(GenBank) cyclic nucleotide-binding protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
rca
Roseiflexus castenholzii
Pathway
rca02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Rcas_1251
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rca02000
]
Rcas_1251
Transporters [BR:
rca02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Rcas_1251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
Zeta_toxin
SMC_N
AAA_22
AAA_29
AAA_23
DUF87
AAA_28
SbcC_Walker_B
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ABU57348
UniProt:
A7NIP5
LinkDB
All DBs
Position
complement(1617715..1619538)
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AA seq
607 aa
AA seq
DB search
MDQFHRLWPFVRRYRRRLLIGALCAMAATAVAAMIPQIVRFAVDDLNTRGVVIERLLQYG
GLLLLAALVEGLLRYGQRTQIIGTSHLIDFDMREALFARLLTLDQGFFTTMHTGDLMTRV
TNDLSAVRMFLGPGISNLLGSTLLLLTAATLMFLTNPALAAIVVLLLPMAAVLFVVIGGR
MRAIFRKVQDQFGEISTRAQENFSGIRTIKAYAQEDAEIRVFRQANERYRALNLRYVLLS
GMLWPIIGLMLGTIGAFVLLIGGRMVAAGEMTVGELVLFNAYLAQLAWPVIALGWTVDLY
QQGAASLVRIGEVLQRRSAIASPPDAPRDFVVRGEVEFRNVGLRFAHSQHTNGNASGHHA
NAPSTSGKPAASGAPEWVLRHISFRIPQGGSLGIVGATGAGKTTLVNLLARVRDPDEGQV
LVDGYDVRTLPLDALRRGIGYVPQDTFLFSVPIRENVTFGRPDATEDQIIHALAVSRLIN
DVEQFPDGIDTLIGERGVTLSGGQKQRTAIARAILRDPAILILDDALSSVDTHTAAEILA
SLRAMMKGRTSMIIAQRIATVKDADQIIVLHNGEIIERGTHRELVERGGRYADMYRRELL
RAELEEE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
gtggatcaattccatcgcctctggccctttgtgcggcgctaccgtcgccggttgctgatc
ggcgcgctgtgcgccatggcagccaccgccgtcgccgcgatgattccgcagatcgtgcgc
tttgccgtcgatgacctgaatacgcgcggcgttgtgatcgagcggttgctccagtacggc
ggattgctgttgctcgctgcgctcgtggaaggattgttgcgctatggacagcgcactcag
atcatcggcacgtcgcacctgatcgatttcgatatgcgcgaagcgctattcgcccgattg
ttaacgctcgatcagggattcttcaccacaatgcacaccggcgacctcatgacgcgggtg
acgaacgatctctcggcagtgcgtatgttccttggtcctggcatcagcaacctgcttggt
tcgacgctgctgctgctgaccgccgcgacgctgatgtttctcacgaatccggcgctggcc
gcaatcgtcgtgctgctcctgccgatggcggcagtgctgttcgtcgtcatcggcggacgt
atgcgcgcgatcttccgcaaggtgcaggatcagttcggtgagatctcaacccgcgctcag
gagaatttcagcggcatccgcacgatcaaggcatatgcccaggaagatgctgagatcagg
gtgtttcggcaagccaatgaacgctaccgcgcgctcaatctgcgctatgtgctgctcagc
ggcatgctctggcccatcattgggttgatgctggggacaatcggcgcttttgtgctgctc
atcggcgggcgcatggttgcagccggcgagatgaccgttggtgaactggtgttgtttaac
gcctacctggcacaactcgcatggcccgttatcgctcttgggtggacggtggacctctat
cagcagggtgcggcatcgctggtgcgcattggcgaggtgcttcaacgccgttctgccata
gcctcgccgcccgatgcgccgcgcgatttcgtggtgcggggagaggtcgagtttcgcaat
gtcgggttgcgcttcgcgcacagccaacatacgaatggcaacgcatccgggcatcacgcg
aatgcgccttcgacgtccggaaagccagccgcctccggtgcgccggaatgggtgctgcgc
catatttcgttccgcattccgcaaggggggtcgctggggatcgtcggcgcaaccggcgcc
ggtaagacgaccctggtcaacctgctggcgcgggtgcgcgacccggacgaggggcaggtg
ctggttgacgggtatgatgtgcgcaccctgcccctcgatgcgctgcgccgcggcatcggc
tatgtgccgcaggatacgttcctgttcagcgtgcccatccgcgaaaatgtgaccttcggc
agaccggacgcgacggaggatcagatcatccacgccctcgccgtttcgcggctgatcaat
gatgtggagcagtttcccgacgggatcgacaccctgatcggcgagcgtggcgtgacgctg
tccggcgggcagaagcaacgcactgccattgcccgcgccatcctgcgcgacccggcaatc
ttgattctcgacgatgcgctttcgagtgtcgatacccacactgccgccgagattcttgcc
agcctgcgcgcgatgatgaaggggcgcaccagcatgattattgcacagcgcatcgcgacg
gtgaaagacgccgatcagatcatcgtgctgcacaatggtgaaatcatcgagcgtggcacg
caccgcgaattggttgaacgcggcggacggtacgccgatatgtaccgtcgcgagttgctg
cgcgccgagttggaggaagagtag
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