Roseiflexus castenholzii: Rcas_1284
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Entry
Rcas_1284 CDS
T00585
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rca
Roseiflexus castenholzii
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rca03009
]
Rcas_1284
Enzymes [BR:
rca01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Rcas_1284
Ribosome biogenesis [BR:
rca03009
]
Prokaryotic type
ribosomal protein modification factors
Rcas_1284
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
ABU57381
UniProt:
A7NIS8
LinkDB
All DBs
Position
1656310..1657758
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AA seq
482 aa
AA seq
DB search
MMKVHIITLGCPKNQVDSEGMSGILAAQGHTLAASADDADVVIVNTCSFIAAAREETLAV
LRDVAACKTPEQRLVAAGCMAESHRAIVAATPGVDATLGTREWTRIAEVVETFQPAATMA
PLNAASAREIIPLTSAGVPSPAPHDLSVPGAYADWRTAPIRRRAVGPSAYLKISDGCNLR
CAFCTIPSFKGDMRSKAIGAILGEAQELAAAGVKEIVLVAQHLTDYGRDLGLKDGLAILL
DEICAVLPENVWVRLMYAYPHGIGERLIATMARHPQICHYLDMPLQHAHPETLRRMRRPP
DTDRTRRLIDDLRAAIPDIAIRSTFIVGFPGETNTEFRALLAFLEDVQFDRVGVFRYSRE
PGTPAAALPDQLAPRIIERRWHEIMRLQQRISRERNRRWLGRVVRVLVEGQGQTDDGRML
SVGRSFRDAPEVDGQVLFWGAATPGTFVDVRVTQALDYDLWGDVVGVLDGEERIVKCIQS
VG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagttcatattatcacccttgggtgccccaaaaatcaggtcgatagcgagggt
atgagcggcattctggcagcgcaggggcatacgctcgctgcaagcgccgatgatgccgat
gtcgtgattgtcaatacctgctcgtttattgcagcggcgcgggaagaaacgctggcggtg
ctgcgcgatgtcgctgcgtgcaaaacgcccgagcagcgcctggtggctgccggttgtatg
gcggaaagtcatcgcgcaatcgttgcagccacgccaggagtcgatgcgactctcggtacg
cgcgaatggacgcgcattgctgaggtggttgagacatttcagcccgcggcgacgatggcg
ccgctcaatgctgcctccgcgcgcgagatcattccgctcaccagcgccggtgttccatct
cctgctccgcacgacctgagcgtgccaggcgcctacgccgactggcgcacggcgccgatc
cgccgccgcgccgtcggtccttcggcatatctgaagatttccgatgggtgcaatctgcgt
tgtgcgttctgcaccattccgtcgttcaagggcgatatgcgctccaaagccataggggcg
atcctcggtgaagcgcaggaactggcagcggcgggcgtgaaggagattgtgctggtggcg
cagcatctgaccgattatgggcgtgatctgggactgaaggatggtctggcgatcctgctc
gacgagatctgcgctgtgctgccggagaatgtctgggtgcgcttgatgtacgcttacccg
cacgggatcggtgagcgcctgatcgcaaccatggcgcgccatccgcagatctgccattat
ctggatatgccgctccagcacgcgcatccagagacgctgcgccggatgcggcgcccgcct
gacacggatcgcacccggcggttgatcgatgacctgcgcgcggcaatacccgacatcgcc
attcgctcgacgttcatcgtcggttttcccggcgagaccaacactgagtttcgggcgctg
ctggcgttcctcgaggatgtgcagtttgatcgggtcggcgtgttccgctattcacgcgaa
ccgggaacgccggccgccgctttgcccgatcagttggcgcctcggatcatcgagcgtcgc
tggcatgagatcatgcggcttcagcagcgaatctcgcgcgaacgcaaccggcgctggctc
gggcgcgtcgtgcgtgtgctggttgagggtcaggggcagaccgacgatgggcggatgttg
agcgtcggtcggtcgttccgtgatgcgcctgaagtcgatggacaggtgttgttctggggc
gcagcaactcctggcacattcgtcgatgtgcgcgtgacacaggcgctcgattatgacctg
tggggcgatgtcgtcggcgtgctcgacggtgaagagaggattgtgaagtgcatccagagc
gttggatag
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