Roseiflexus castenholzii: Rcas_1512
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Entry
Rcas_1512 CDS
T00585
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rca
Roseiflexus castenholzii
Pathway
rca03030
DNA replication
rca03410
Base excision repair
rca03420
Nucleotide excision repair
rca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rcas_1512
03410 Base excision repair
Rcas_1512
03420 Nucleotide excision repair
Rcas_1512
03440 Homologous recombination
Rcas_1512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rca03032
]
Rcas_1512
03400 DNA repair and recombination proteins [BR:
rca03400
]
Rcas_1512
Enzymes [BR:
rca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rcas_1512
DNA replication proteins [BR:
rca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Rcas_1512
DNA repair and recombination proteins [BR:
rca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Rcas_1512
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rcas_1512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
NYN_YacP
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
ABU57605
UniProt:
A7NJD5
LinkDB
All DBs
Position
1931195..1934113
Genome browser
AA seq
972 aa
AA seq
DB search
MAHNRPLLLLIDGHALAYRAFHALAEAGLRSSTGEPTYAVYGFTSAMLNAIEEYQPEYAA
VAFDVGKTFRDDLYAEYKANRAETPAEFEQQLERIKQVLAAFDIPIYTAEGYEADDVIGT
LARQATERGVDVLILTGDTDTLQLVDDHVTVLLNNPYLRGPKNTTRYGVAEVTERYKGLR
PHQLADLRGLKGDPSDNIPGVKGIGEAGAIALLNQFGTIENLYDHLDEAPKRYQKHLEGQ
RDIALFSKKLATIVCDAPVTLNLADATLADYDRSRVIAVFQELEFGASLVKRLPPSGSTT
VAQPLPSIPQADASAPLQADMFAPEAPAVRESSAEPQQLTLFGDPEVVPPPVAHVEAPLR
AAPGEYRAACTDADLEAVVAELATAPLVAFDTETRGMNPLRDDLVGLSLATVPGRAWYIP
VGHTTGEMQLPRDRVIAALRSFFADPARPKVAHNAKFDIEVLERAGMPVAGLSFDTMLAA
GLLDKRRNLKDLAFYELELAEPLDAIGDLIGKGKNQVTFAEVPIARATRYAAADADMTLR
LQPALEAKLRAAGSLADMFYRLEMPLVPVLVRMEQSGILLDVPYMRALGERMGRELAQIE
QQIFAIAGKPFNINSGDQLSEVLFGPKINLPTTGLERTRTGRYSLTAQALEELQASDTTG
IIELILRHRRLSKLKSTYVDELPALVNPETGRVHTDYNQLGAATGRLSSNSPNLQNIPTR
TEEGREVRRGFIAAPGHVLIAADYSQIELRVLAHITGDPNLIQTFIEGRDIHAATAARLF
GVGFNAVDKNQRRIAKTVVFGVIYGISPFGLAQRLGISREQARNLIDSLFNQFPRIRDYI
DRTLETGRNEGYVQSLFGRRRPMFDLRTSGPRRQAAEREAINHPIQSTAADIMKLAMIAV
DAELRRRRLRTRMLLQVHDELIFEAPEAEVDEVVALVRERMEGVLSDMHPPFAVPLRVEI
EKGSNWEELTPV
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
gtggcacacaaccgtccgctgctgttgctgatcgatggtcatgcgttggcgtatcgcgcc
ttccacgcgctggcggaagcggggttgcgctcctcgaccggcgagccaacctatgcggtc
tacgggttcacctcggcgatgctcaatgccatcgaggagtatcaaccggaatatgccgca
gtggcgttcgatgtcggcaagactttccgcgacgatctgtacgccgaatacaaggcgaac
cgcgccgagaccccggctgagtttgagcagcaactggaacgcatcaagcaggtgctagcg
gcgttcgacattccgatctataccgccgaaggatacgaagccgatgatgtgatcggcacg
ctggcgcgtcaggcgactgaacgcggcgttgatgtgctgatcctcaccggcgataccgat
acgctgcaactggtcgacgatcatgtgaccgtgctcctcaacaatccgtatctccgcgga
ccgaaaaataccacgcgctacggcgtcgcggaggtgacggaacgctacaaagggctgcgc
ccccatcaacttgccgacctgcgcggcttgaagggcgatccgtccgacaatatccccggt
gtcaaaggcattggtgaggctggcgcaattgcgctcctcaatcagtttggcacaatcgag
aacctgtacgaccatctggacgaagcgccgaaacgctatcagaagcatctcgaagggcag
cgcgacattgcgctgttcagcaagaaactggcgaccattgtgtgtgatgcgccggtaacg
ctcaaccttgcagacgcaacgctcgccgattacgaccgcagccgggtgatcgcggtcttt
caggaactcgagtttggtgcatcgctggtgaagcgccttccgccatccggcagtacgacc
gttgcgcagccgctgccgtccataccgcaggcagacgcatcggcgccgcttcaggcggac
atgttcgcgccggaagcgcctgctgtgcgagagtcgtccgccgagccgcagcagttgacc
ctgtttggcgatccagaggttgtgccgccgccggtcgcgcatgtcgaggcgccgctgcgc
gcagcgccgggtgaataccgcgctgcctgcaccgatgccgacctggaagcggtggtcgcc
gaactcgccacggcgccgctggttgcgttcgataccgaaacgcgcgggatgaacccgctg
cgcgatgatctcgtcggtctgtcgctggcgacggtccccggtcgagcctggtacattccc
gtcgggcataccaccggcgagatgcaattgccgcgcgatcgggtgatcgcggcgctacgc
tcattctttgccgatccggcgcgccccaaggttgcccacaacgccaagtttgatatcgaa
gtgctggaacgcgccggcatgccggtcgccggtttgtcgttcgatacgatgctggcggct
ggcttgctcgacaaacgtcgtaatttgaaagacctggcgttctacgaactggaactcgct
gaaccgctggacgcaattggcgacctgatcggcaaggggaagaaccaggtcaccttcgca
gaggtgccgattgcccgcgctacgcgatatgctgctgccgacgccgatatgacgctgcgc
ctgcaaccggcgctcgaagcgaaactgcgtgctgccgggagtctcgccgatatgttctac
cgcctggaaatgccgctcgtgccggtgctggtgcggatggagcagtccggcattctgctg
gatgttccgtatatgcgcgctctgggggagcgcatgggtcgggaacttgcacagatcgag
cagcagatctttgccatcgccgggaaaccgttcaatatcaactccggcgatcagttgagc
gaggtgctgttcggtcccaagatcaacctgcccacaacgggtctcgaacgcacccggaca
gggcgctactcgctgacggcgcaggcgctcgaagagttgcaggcaagcgacactaccggc
attattgagttaatcctgcgccaccgtcgcctgagcaaactcaaatcaacctatgttgat
gaactcccggcgctggtcaacccggagaccggcagagtccataccgattacaatcagctt
ggtgcggcgaccgggcggttgagcagcaattcgccgaacctgcaaaatattccaacccgc
accgaagaggggcgcgaggtgcggcgcggcttcatcgctgcccccggtcatgtgttgatc
gccgccgactattcgcagatcgagttgcgcgtgctggcgcacatcaccggcgatccgaac
ctgatccagacgtttattgaagggcgcgacattcacgcagccaccgccgcacgtctgttc
ggcgtcggtttcaatgccgtggacaagaatcagcggcggatcgccaaaaccgtcgttttt
ggcgtcatctacggcatcagcccattcgggttggcgcaacgcctgggtatttcgcgcgaa
caggcgcgcaacctgatcgatagcctgttcaatcagttcccccgcatccgcgactacatc
gaccgcacgctggaaaccggacggaatgaagggtatgtgcagtcgctcttcggccgccgc
cgccccatgttcgacctgcgcacgtccggtccgcggcgtcaggcagccgaacgtgaagcg
atcaaccatccgatccaatccacagcggcggacatcatgaaactggcgatgattgctgtg
gatgccgaactgcgtcgccgccggttgcgcacccgcatgttgctccaggttcacgacgaa
ttgatcttcgaggcgccggaggcggaagtggatgaggtggtggcgctggtgcgcgagcga
atggaaggggtgttgagcgatatgcacccgccgttcgccgtcccgctgcgcgtcgagatc
gaaaaaggttcgaattgggaagaactgacgccagtgtga
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