Roseiflexus castenholzii: Rcas_1545
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Entry
Rcas_1545 CDS
T00585
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rca
Roseiflexus castenholzii
Pathway
rca03030
DNA replication
rca03430
Mismatch repair
rca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rcas_1545
03430 Mismatch repair
Rcas_1545
03440 Homologous recombination
Rcas_1545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rca03032
]
Rcas_1545
03400 DNA repair and recombination proteins [BR:
rca03400
]
Rcas_1545
Enzymes [BR:
rca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rcas_1545
DNA replication proteins [BR:
rca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rcas_1545
DNA repair and recombination proteins [BR:
rca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rcas_1545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
RNase_T
DEAD
DEAD_2
DNA_pol_A_exo1
ResIII
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ABU57638
UniProt:
A7NJG8
LinkDB
All DBs
Position
complement(1972431..1975265)
Genome browser
AA seq
944 aa
AA seq
DB search
MDQIYVAIDVETTGLEAGVDEIIEIAAVKFRTGEVIETFDTLVQPRHSLPLNSSRLTGIT
AEMLAGAPRFSEVAPRFAAFLKNYPLVGHNVRFDINMLQAQGMRLPQPAFDTFELATLLM
PRTPAYRLSALAETLGIVHDEAHRALSDADVTRQVFLHLLRRIDALSLNDLNEIVRLTSR
VDWTLRPLFEAAQRAKALRVFVDETPISDTDSRESDEKLTPLKPTGNDRPIDLAEIRWFF
SPAGALGRAFEGYEQRNQQVRMSEAVADTLNQGGTLIAEAGTGTGKGLAYLVPAALHAAR
RGERVVISTNTINLQDQLFFKDIPALQRVMSNGVDDKPPFTAALLKGRSNYLCLKRYHDL
RRDRDQRLMSDDVRALLKVQLWLHATESGDRAELPLQEGEHATWSKLSAAWDQCTGPRCS
EFHRCFFFKARRQAEAAHLVIVNHALLVADLAAENDVIPPYDYLIIDEAHNLEDVATDQL
SFNVDREGLLAFLDDIFVEDQAQIVGGLLSELPNHFRESMVTRIDIDRADTITAALRPAV
ARARDAVYGCFNTLIAFVRRDAELSAADARLRISSALRRKPAWAEVERAWDMLNNALTAI
GEGLGQLETLLIDLKDAELPEYDALMLRVQTLKRYATEVRINIGHILTGGAEEKVTWLTH
DRLRDTLTLSAAPLSVAEILRTNLFERKSATVLTSATLSVGGDFRFVRERIGLDEAEELA
LESPFDYTRQALLYIPNDIPEPSHPGYQRAMEQAIIDLARATNGRMLVLFTAINALRQTY
RAIQEPLEDAGIAVLGQGIDGSRRSLLERFKEFPGTVLLGTSSFWEGVDVVGDALSVLVI
AKLPFSVPTDPIFAARSEQFDDAFNQYAVPQSILRFKQGFGRLIRSKDDRGIVAVLDRRL
LTKKYGQTFLDSLPHTTVRSGPLQRLPDLAKRFLAATNGMSGTA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaatctatgtagcaatcgatgtcgaaaccaccggtctcgaggcgggagtcgat
gaaattatcgaaattgcagcggtcaagtttcgcaccggtgaggtgatcgaaacgttcgac
accctcgtgcaaccgcgtcattctctgccccttaattccagccgtctgacgggcatcacc
gctgagatgcttgccggtgcgccgcgcttttcggaggtcgcgccgcgcttcgctgcgttc
ctcaagaactatccgctcgtcgggcacaatgtccgcttcgatatcaatatgcttcaggcg
cagggtatgcgcctgccgcaaccggcgttcgacacctttgaactggcgacgctcctgatg
ccgcgcacacccgcctatcgcctcagcgcactggcggaaacgcttggcatcgttcacgat
gaggcgcatcgcgcccttagcgacgccgatgtgacccggcaggtctttctgcatctgctc
cggcgtatcgatgctctcagcctgaacgacctgaatgagattgtgcgcctgacatcgcgt
gtcgattggacgctgcgaccgctcttcgaagcagcgcagcgcgccaaggctctgcgcgtc
tttgtggacgaaacgccgatcagcgacactgattcgcgggagtcagacgagaaactgaca
ccgctcaaaccaaccgggaatgaccgcccaatcgacctggcggaaatccggtggttcttc
agccctgccggtgcgcttgggcgcgctttcgaggggtatgagcagcgcaatcagcaggtg
cggatgtccgaagcggtcgccgacacccttaatcagggcgggacgctgatcgccgaagcc
ggcaccggcaccggcaaaggtctggcgtatctggttccggcggcgctacacgccgcgcgc
cgcggcgagcgcgtcgtcatttcgaccaatacgatcaatttgcaggatcaactcttcttc
aaggatattccggcgcttcagagggtgatgtccaacggcgtggacgacaaaccgccgttt
actgcggcgttgctcaaggggcgcagcaattatttgtgcctcaaacggtaccacgatctg
cgccgtgatcgcgatcagcggctgatgtcggacgatgtgcgcgcgctgctcaaggtgcag
ttgtggctgcatgcgaccgagagcggcgaccgcgcggaattgccgcttcaggaaggtgaa
catgcgacatggagcaaattgagcgccgcctgggatcagtgcaccggtccgcggtgcagt
gagttccatcgttgcttcttcttcaaggcgcgccggcaggcggaggccgcgcacctggtg
attgtcaatcacgcgcttctcgtggcagacctcgcagccgaaaatgatgtcattccgccc
tatgattatctcattatcgacgaggcacataatctggaagatgtcgccaccgatcagttg
agtttcaatgttgatcgggaagggctgcttgcgttcctcgatgatatttttgtcgaagac
caggcgcagatcgtcggcgggttgctgagcgaactgccgaaccatttccgcgaaagcatg
gttacccggatcgatattgaccgcgccgacacgatcacggcggcgctgcgtccggcggtg
gcgcgcgcgcgcgatgcggtctacgggtgcttcaacacgttgatcgcgttcgtccgacgc
gatgccgaactgtcggctgccgatgcacgcctgcgcatctccagcgcgctgcgccgcaaa
ccggcttgggcagaggtcgaacgcgcctgggacatgctcaacaacgcgcttaccgccatc
ggtgagggattgggacaactggaaacgctcctgatcgacctgaaggacgccgaattgccg
gagtatgatgcgctgatgctgcgggtgcagacgctcaagcggtatgcgaccgaggtgcgc
attaatatcgggcatattctgaccggcggcgctgaggaaaaagtcacctggctgacccac
gaccgtctgcgtgacacgttgaccctttccgctgcacccctctccgttgccgagattttg
cgcaccaacctgttcgagcgcaaaagcgctacagtactgacctcggcgacgctgtcggtc
ggcggcgatttccgcttcgtccgcgagcgcatcggcctggatgaagccgaagaactggcg
ctcgaatcgccgttcgattacacccgtcaggcgctcctctatattccgaacgatattcct
gagccgtcacatccggggtatcagcgcgcaatggagcaggcgatcatcgacctggcgcgt
gcgacgaacgggcgcatgctggtgttgtttactgccatcaatgcgctgcggcagacgtat
cgcgccattcaggaaccgctggaagacgccgggattgccgtgctcggtcaggggatcgac
ggctcgcgccgcagtctgctcgaacgcttcaaggagtttcccggcaccgtgctgctcggc
acatcaagtttctgggaaggggtcgatgtggtcggcgatgcgctctcggtgctggtgatc
gccaaactccccttcagcgtgccgaccgacccgatcttcgccgcgcggtcggagcagttc
gacgatgcgttcaatcagtacgccgttccacagtcgatcctgcgcttcaagcaggggttc
gggcgcctgatccgctcaaaggacgaccgcggtatcgtggcagtgctcgaccgccgcctc
ctgacgaaaaaatatgggcagacgtttctcgactcattgccgcacaccaccgtgcgcagt
ggtccgttgcagcgccttcccgacctggcaaagcgtttcctggctgcgacgaatggtatg
tcggggacggcgtag
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