Roseiflexus castenholzii: Rcas_1578
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Entry
Rcas_1578 CDS
T00585
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rca
Roseiflexus castenholzii
Pathway
rca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rca00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rcas_1578
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rca02000
]
Rcas_1578
Transporters [BR:
rca02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Rcas_1578
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABU57671
UniProt:
A7NJK1
LinkDB
All DBs
Position
2027368..2029155
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AA seq
595 aa
AA seq
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MSSRIFPVSNSHLSPVHSTPVLRLPLRRLFGVSTFVAIALLGVLVACGAPEQPATPAGVS
PMPAPTTAPPTATALPRGGNLTIRLAADVAELRPWHPRTRGEEQLIALLYSGLTRLDGTL
APQPDLAAGWTASADGRTITLTLRHDAVWHDGQPVTADDVVFTLNELRALEPTTALLAGL
RRMTEVTAPATDTVVVRLDERYAPIFSLLTAPVLPRHALSGRSLADLNAWEAPVGSGPFR
LERREPGTAITLAANQSFYRGAPLLDRVVFVVAPDAQVAASALQNGQLLLAELPWSEGRA
LTETMPMLQTGAYAENGYYFLAFNLRPNRIFSDLRLREALALTIDLPRMIREATNGQGMI
IGNSAAPGSWADLTPPSTTTVDLDRARALLDEAGWRLPSDGVVRQKDGVTLTAQLFVRAD
DPRRVRAAELIAGAAEQIGMDIVVQPADFATVIRSKYAPPYDFDMLLGSWINGVADPTFG
DYAYYDPDDFALFHSSQINQGVADTRPVLNFVGFSDPVYDDQAGAARQLYDLTERAQAIR
RAQERVALLRPYLFLWTDRLPVACSARLTTLDGPINLATPNYLWNIERWYVTGEG
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcagaatcttccccgtgagtaattcgcatctatcgccagtccattccactcct
gtgctccggttgccgttgcgccgattgtttggcgtcagcacatttgttgcaattgcgttg
ctgggggtgcttgtcgcctgtggtgcgccggaacaacctgccacacccgcgggcgtctcg
ccgatgcctgcgccaaccacagcgccgccgactgcgacagcgctgccgcgcggcggcaat
cttacaatccggttggctgccgatgttgctgagttgcgcccctggcatccacgtacacgt
ggcgaggaacagctcatcgcgctgctctacagcggtctgacccgcctggacggcacgctg
gcgccgcagccggatctggcggcaggctggacggcttctgccgatgggcggacaattaca
ttgacgttgcgccacgatgcggtctggcacgatggacagccggtgacggcggatgatgtg
gtctttactctcaacgaattgcgcgcactcgaaccaaccacggcgttgctcgccgggtta
cggcgtatgacggaggttacagcgccggcaaccgataccgtcgtggtgcgtctcgatgaa
cgctacgcgccgatctttagcctgttgacggcgccggtgttgccgcgccatgccctgagc
ggcagaagtttggcggatctcaacgcctgggaagcgccggtcggcagcggtccatttcgc
ctggagcggcgtgagccgggcacggcgatcacgctggcggccaatcaatcgttttaccgg
ggcgcgccgttgctcgaccgggtggtgttcgtggtggcgcccgatgcgcaggtggcggcg
tccgcgctccagaatgggcagttgctcttggcggaactgccctggagcgaagggcgcgcg
ctcaccgaaacaatgccaatgctccaaaccggcgcatatgccgagaatggctactacttc
ctggcattcaacctgcgccccaaccgtatcttcagtgatctgcggctgcgtgaggcgctg
gcgctcactatcgatctgccgcgcatgatccgggaagcgactaacgggcagggcatgatc
atcgggaacagcgccgctcctggctcctgggcagacctgacgccgccgtcaacgacgacc
gtggacctggatcgcgcgcgcgcgctgctcgatgaggcagggtggcggctcccgtcggat
ggcgtggtgcggcaaaaagatggtgtgacgctcaccgcgcaactctttgtgcgcgctgac
gatccgcgtcgggtgcgcgctgccgaactgattgctggcgccgccgagcagatcgggatg
gacattgtggtgcaacccgctgacttcgcaacggtgattcgctcgaagtatgcgccaccc
tatgatttcgacatgctcctcggcagctggatcaatggcgtcgccgacccgactttcggt
gactacgcctactacgatccagacgattttgcgctgtttcattcgagtcagatcaaccag
ggggtggcggatacgcgccctgtgttgaactttgtcgggtttagcgacccggtgtacgat
gatcaggcaggcgcagcgcggcaattgtacgatctgacagaacgggcgcaggcaatccgg
cgggcgcaggaacgagtggcgctgctgcgtccctacctgttcctgtggacggatcggttg
ccggtggcatgcagcgcgcgcctgacaacgctggacggaccgattaacctggcgacgccg
aactatctgtggaatatcgaacggtggtatgtcacaggtgagggttga
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